Factsheet for Solyc08g080770.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032166	Potato	plastid	91.04	91.04
Solyc08g080760.1.1	Tomato	mitochondrion	83.02	88.44
Solyc12g056310.1.1	Tomato	plastid	53.77	57.87
VIT_02s0025g03730.t01	Wine grape	cytosol	54.25	56.93
VIT_02s0025g03740.t01	Wine grape	plastid	53.77	55.34
Solyc08g080750.2.1	Tomato	plastid	51.42	53.96
VIT_02s0025g03750.t01	Wine grape	cytosol	52.36	52.86
KRH27952	Soybean	cytosol	42.92	47.15
Solyc08g007980.2.1	Tomato	plastid	46.23	47.12
KRH59852	Soybean	cytosol	43.4	46.94
KRH77515	Soybean	cytosol	41.51	45.36
KRH41152	Soybean	cytosol	30.66	43.62
Bra027804.1-P	Field mustard	cytosol	37.26	41.36
CDY49893	Canola	cytosol	37.26	41.36
TraesCS2A01G113800.1	Wheat	plastid	40.57	41.15
HORVU2Hr1G019720.1	Barley	plastid	40.09	40.67
TraesCS2B01G132800.1	Wheat	plastid	40.57	40.19
EER99890	Sorghum	plastid	38.21	39.9
TraesCS2D01G114400.1	Wheat	plastid	40.57	39.81
Os07t0672600-00	Rice	plastid	41.51	38.43
CDY45367	Canola	cytosol	27.83	38.31
AT1G63410.2	Thale cress	cytosol	38.21	37.67
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	39.62	34.57
Zm00001d029119_P001	Maize	mitochondrion	39.15	33.6
HORVU6Hr1G081400.1	Barley	mitochondrion	40.09	33.6
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	39.15	33.2
TraesCS4D01G168500.1	Wheat	mitochondrion	40.09	32.95
KXG39402	Sorghum	mitochondrion	39.15	32.17
Solyc03g116710.2.1	Tomato	cytosol	26.42	26.54
Solyc08g081680.1.1	Tomato	nucleus	25.47	23.38
Solyc09g005210.2.1	Tomato	nucleus	24.06	19.47
GSMUA_Achr3P24000_001	Banana	nucleus	44.34	11.38

Protein Annotations

EnsemblPlants:Solyc08g080770.2.1	EnsemblPlantsGene:Solyc08g080770.2	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF25	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	UniParc:UPI000276BAED	UniProt:K4CP75	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr8:+:63977809..63978913

Molecular Weight (calculated)

24044.0 Da

IEP (calculated)

9.741

GRAVY (calculated)

-0.212

Length

212 amino acids

Sequence
(BLAST)

001: MAKVHPNKSN YLSTTSSSSF SSIIPSNFYV SPRRETFTLW MKSLVYHGNG CTVYDSNGNI VYRIDNYNSK RSKEVHLMDR NGKVLFSIRN RKVPVFGHWD
101: GYKWSYDGIT SKEMPWFQVK KIHNVLRGEN VNCYSVILGC NSEATCYNII LATKSIKIVN QHGRLVAEVK QKQANSGVLL GDDVLTLMVE PHVDQSLIMA
201: LVTVCGLIHH KI

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.