Factsheet for Solyc08g080760.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032165	Potato	cytosol	79.9	91.91
Solyc08g080770.2.1	Tomato	plastid	88.44	83.02
Solyc12g056310.1.1	Tomato	plastid	55.28	55.84
VIT_02s0025g03730.t01	Wine grape	cytosol	55.78	54.95
VIT_02s0025g03740.t01	Wine grape	plastid	55.28	53.4
VIT_02s0025g03750.t01	Wine grape	cytosol	54.77	51.9
Solyc08g080750.2.1	Tomato	plastid	49.75	49.01
KRH27952	Soybean	cytosol	42.71	44.04
KRH77515	Soybean	cytosol	42.21	43.3
Solyc08g007980.2.1	Tomato	plastid	45.23	43.27
KRH59852	Soybean	cytosol	42.21	42.86
Bra027804.1-P	Field mustard	cytosol	39.7	41.36
CDY49893	Canola	cytosol	39.7	41.36
KRH41152	Soybean	cytosol	30.15	40.27
EER99890	Sorghum	plastid	39.2	38.42
CDY45367	Canola	cytosol	29.65	38.31
TraesCS2A01G113800.1	Wheat	plastid	40.2	38.28
HORVU2Hr1G019720.1	Barley	plastid	39.7	37.8
AT1G63410.2	Thale cress	cytosol	40.7	37.67
TraesCS2B01G132800.1	Wheat	plastid	40.2	37.38
TraesCS2D01G114400.1	Wheat	plastid	40.2	37.04
Os07t0672600-00	Rice	plastid	42.21	36.68
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	39.2	32.1
Zm00001d029119_P001	Maize	mitochondrion	39.2	31.58
HORVU6Hr1G081400.1	Barley	mitochondrion	39.7	31.23
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	38.69	30.8
TraesCS4D01G168500.1	Wheat	mitochondrion	39.7	30.62
KXG39402	Sorghum	mitochondrion	39.7	30.62
Solyc03g116710.2.1	Tomato	cytosol	28.14	26.54
Solyc08g081680.1.1	Tomato	nucleus	28.64	24.68
Solyc09g005210.2.1	Tomato	nucleus	22.61	17.18
GSMUA_Achr3P24000_001	Banana	nucleus	43.22	10.41

Protein Annotations

EnsemblPlants:Solyc08g080760.1.1	EnsemblPlantsGene:Solyc08g080760.1	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF25	PFAM:PF04525	SUPFAM:SSF54518
UniParc:UPI000276BAEC	UniProt:K4CP74	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr8:+:63972455..63973276

Molecular Weight (calculated)

22657.4 Da

IEP (calculated)

9.597

GRAVY (calculated)

-0.184

Length

199 amino acids

Sequence
(BLAST)

001: MSRVYSNLRT INISNYVSPR RETFTLWMKS LVYHGNGCTA YNSNGQIVYR IDNYNIKRSK EVHLMDCNGK VLFSIRNRKV PVFGHWDGYK WSYDGITSKE
101: KPWFQVKKIH NVLRGENVNY YSVILGCNSE ATCYNIILAT KSIKIVDQHG GLVAEVKQKQ ASSGVLFGDD VLTLVVEPHV DQSLAMALVT VCGLIHHRI

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.