Factsheet for TraesCS4B01G155500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	90.8	93.42
TraesCS4D01G168500.1	Wheat	mitochondrion	94.0	91.09
HORVU6Hr1G081400.1	Barley	mitochondrion	89.6	88.54
TraesCS2B01G132800.1	Wheat	plastid	44.8	52.34
Zm00001d029119_P001	Maize	mitochondrion	51.2	51.82
KXG39402	Sorghum	mitochondrion	50.4	48.84
VIT_02s0025g03730.t01	Wine grape	cytosol	35.2	43.56
VIT_02s0025g03750.t01	Wine grape	cytosol	36.4	43.33
VIT_02s0025g03740.t01	Wine grape	plastid	35.2	42.72
KRH47711	Soybean	peroxisome	33.6	42.64
KRH06275	Soybean	peroxisome	33.2	41.29
Bra021544.1-P	Field mustard	cytosol	33.6	40.38
PGSC0003DMT400007876	Potato	plastid	32.4	40.3
Bra001544.1-P	Field mustard	cytosol	33.2	39.9
PGSC0003DMT400032165	Potato	cytosol	27.6	39.88
TraesCS3B01G487000.1	Wheat	plastid	31.2	39.8
Solyc08g080770.2.1	Tomato	plastid	33.2	39.15
Solyc08g080750.2.1	Tomato	plastid	31.6	39.11
TraesCS3B01G486300.1	Wheat	plastid	30.4	38.78
Solyc08g080760.1.1	Tomato	mitochondrion	30.8	38.69
KRH77515	Soybean	cytosol	30.0	38.66
PGSC0003DMT400014913	Potato	plastid	32.0	38.46
KRH27952	Soybean	cytosol	29.6	38.34
PGSC0003DMT400032166	Potato	plastid	32.4	38.21
TraesCS3B01G486200.1	Wheat	plastid	30.4	38.19
KRH59852	Soybean	cytosol	29.6	37.76
Solyc08g007980.2.1	Tomato	plastid	31.2	37.5
CDY33238	Canola	cytosol, peroxisome, plastid	34.4	37.39
TraesCS3B01G487200.1	Wheat	cytosol	29.2	37.24
CDY67855	Canola	peroxisome	33.6	36.52
AT3G14260.1	Thale cress	cytosol	33.6	36.52
TraesCS3B01G486900.1	Wheat	cytosol, plastid	28.4	36.22
CDX82489	Canola	cytosol	33.2	36.09
Solyc12g056310.1.1	Tomato	plastid	28.0	35.53
TraesCS3B01G486600.1	Wheat	cytosol	28.0	35.53
CDY24067	Canola	cytosol	28.4	35.32
CDY24068	Canola	peroxisome	28.4	35.32
Bra039698.1-P	Field mustard	cytosol	28.4	35.32
CDX75761	Canola	cytosol	32.4	35.22
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	27.6	34.33
Bra039696.1-P	Field mustard	cytosol	27.6	34.33
AT1G53870.3	Thale cress	cytosol, nucleus, peroxisome	29.6	34.1
CDY49893	Canola	cytosol	26.0	34.03
Bra027804.1-P	Field mustard	cytosol	26.0	34.03
TraesCS3B01G487100.1	Wheat	plastid	28.4	33.97
CDY71164	Canola	cytosol, extracellular, peroxisome	26.0	33.85
TraesCS3B01G486800.1	Wheat	plastid	30.4	33.63
PGSC0003DMT400012847	Potato	cytosol	17.6	33.33
PGSC0003DMT400010898	Potato	cytosol	16.8	33.07
KRH41152	Soybean	cytosol	19.6	32.89
CDY24069	Canola	cytosol	22.4	32.0
AT1G53875.1	Thale cress	cytosol, mitochondrion, nucleus, peroxisome	28.4	31.14
AT1G63410.2	Thale cress	cytosol	26.4	30.7
CDY45367	Canola	cytosol	18.8	30.52
CDY36610	Canola	cytosol	17.6	29.73
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	23.6	28.37
CDY36612	Canola	cytosol	15.2	27.94
TraesCS3B01G372400.1	Wheat	plastid	22.8	27.67
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	22.4	27.59
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	22.4	27.32
TraesCS4B01G396800.1	Wheat	plastid	22.8	26.89
TraesCS5B01G144000.1	Wheat	cytosol	23.6	25.88
AT1G53890.3	Thale cress	cytosol	24.4	25.1
TraesCS4B01G123400.1	Wheat	cytosol	21.2	21.72
TraesCS5B01G143700.1	Wheat	plastid	21.6	20.45
TraesCS5B01G143600.1	Wheat	mitochondrion	20.0	20.16
TraesCS3B01G340800.1	Wheat	cytosol	17.2	19.55
TraesCS1B01G341900.1	Wheat	cytosol	16.0	17.02
GSMUA_Achr3P24000_001	Banana	nucleus	39.2	11.86

Protein Annotations

EnsemblPlants:TraesCS4B01G155500.1	EnsemblPlantsGene:TraesCS4B01G155500	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF51	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:278411514..278412266

Molecular Weight (calculated)

27614.0 Da

IEP (calculated)

8.828

GRAVY (calculated)

-0.326

Length

250 amino acids

Sequence
(BLAST)

001: MGGARWCLGA ELWTPKVKVH SSASCSSQKR LLPEDTPTAD APPAEEPAAA VGQGQVVKDE GEGVGEEHRS QQREVFTIWM KSLVLNGSGC TVFDSRGRIV
101: YRVDNYGSHR SVDVCLMDIT GSVVLQVLKK FRRWEGYRCG GWDRADAPRR LPWFTVVSNK WSRGPRCEFR SDGHAVRYKM DGGRRRQQAA RASWIVDDAT
201: GLAVAEVKRK LTATGVSLGE DVLTLVVEPN VDHSLIMGLL VVHGLINHSM

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.