CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	peroxisome
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039698.1-P	Field mustard	cytosol	100.0	100.0
CDY24069	Canola	cytosol	80.6	92.57
CDY24068	Canola	peroxisome	91.04	91.04
CDY36610	Canola	cytosol	66.67	90.54
CDY71164	Canola	cytosol, extracellular, peroxisome	85.07	89.06
CDY36612	Canola	cytosol	45.77	67.65
AT1G53875.1	Thale cress	cytosol, mitochondrion, nucleus, peroxisome	74.63	65.79
AT1G53870.3	Thale cress	cytosol, nucleus, peroxisome	69.15	64.06
CDY33238	Canola	cytosol, peroxisome, plastid	58.21	50.87
CDX75761	Canola	cytosol	57.71	50.43
CDX82489	Canola	cytosol	57.21	50.0
CDY67855	Canola	peroxisome	56.22	49.13
AT1G53890.3	Thale cress	cytosol	58.21	48.15
KRH47711	Soybean	peroxisome	40.3	41.12
KRH06275	Soybean	peroxisome	40.8	40.8
TraesCS2A01G113800.1	Wheat	plastid	38.81	37.32
TraesCS2B01G132800.1	Wheat	plastid	39.3	36.92
HORVU2Hr1G019720.1	Barley	plastid	38.31	36.84
TraesCS2D01G114400.1	Wheat	plastid	39.3	36.57
CDY49893	Canola	cytosol	34.33	36.13
CDY45367	Canola	cytosol	25.37	33.12
EER99890	Sorghum	plastid	33.33	33.0
Os07t0672600-00	Rice	plastid	37.31	32.75
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	35.32	29.22
HORVU6Hr1G081400.1	Barley	mitochondrion	35.82	28.46
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	35.32	28.4
Zm00001d029119_P001	Maize	mitochondrion	33.83	27.53
TraesCS4D01G168500.1	Wheat	mitochondrion	35.32	27.52
CDY60759	Canola	cytosol	26.37	27.18
CDX91482	Canola	cytosol	25.87	26.67
KXG39402	Sorghum	mitochondrion	33.83	26.36
CDY18377	Canola	cytosol	24.88	25.51
CDY07714	Canola	cytosol	24.38	25.13
CDY62435	Canola	cytosol	24.38	25.13
CDX93313	Canola	cytosol	24.38	25.0
CDY07715	Canola	cytosol	24.38	25.0
CDY62436	Canola	cytosol	24.38	25.0
CDY41119	Canola	cytosol	23.88	22.86
CDY37567	Canola	cytosol	23.88	22.86
CDY58464	Canola	cytosol	23.38	22.07
CDX75845	Canola	cytosol	23.38	22.07
CDY30113	Canola	cytosol	22.89	21.0
CDX87294	Canola	cytosol	22.89	17.9
GSMUA_Achr3P24000_001	Banana	nucleus	38.31	9.32

Protein Annotations

EnsemblPlants:CDY24067	EnsemblPlantsGene:GSBRNA2T00024606001	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF30	PFAM:PF04525	ProteinID:CDY24067
ProteinID:CDY24067.1	SUPFAM:SSF54518	UniParc:UPI000253E776	UniProt:A0A078GG03	MapMan:35.1	:

Description

BnaA06g00650DBnaA06g00650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GG03]

Coordinates

chrLK032153:-:250068..250699

Molecular Weight (calculated)

22704.2 Da

IEP (calculated)

8.565

GRAVY (calculated)

-0.290

Length

201 amino acids

Sequence
(BLAST)

001: MVQIHPVQAL SVVSGAGEEK SSPYVATEQQ SFTIWMRSLV YHSKGCTVYD SKGNLIYRVD NYDSKSCGEV YLMDLYGEVL FEFQQKFGLF KSCEGYNSTG
101: TRFRLRKNFK ISPRGSSSSY KVVMESNKDD RQSCYKILNH ASVFTIEDGS GRFMAEVKKK RSNVNGLDFG EDVLTMVVEP QVDHSFIMGI VIAYGLLKSK
201: L

Best Arabidopsis Sequence Match ( AT1G53875.1 )
(BLAST)

001: MQIYSNNRTM RTKFSLNLIS PAKNMVKIHP DKAFPVDFSV GEGKTSPYLT TEKESFTIWM RSLVFHSKGC TVFDSKGNLI YRVDNYNSKS CSEVYLMDLY
101: GKILFTLRQK KLGLFKSWKG YNSTGTRFQL RKNFKILPKG SSSSYKVVMG SRIVDGDHQS CYKIVKRKSV FTIEDGSGRL LAEVKKKQSN IKSLDLGKDV
201: LTMMVEPQVD HSLIMGIVIA YSLLKCKL

Arabidopsis Description

LURP-one-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AWJ7]
SUBAcon: [cytosol,nucleus,peroxisome,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.