CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67855	Canola	peroxisome	97.39	97.39
AT3G14260.1	Thale cress	cytosol	84.78	84.78
CDX82489	Canola	cytosol	83.91	83.91
CDX75761	Canola	cytosol	82.17	82.17
CDY24068	Canola	peroxisome	51.74	59.2
CDY24067	Canola	cytosol	50.87	58.21
CDY71164	Canola	cytosol, extracellular, peroxisome	47.39	56.77
CDY24069	Canola	cytosol	43.04	56.57
CDY36610	Canola	cytosol	35.22	54.73
CDY36612	Canola	cytosol	27.83	47.06
KRH47711	Soybean	peroxisome	36.96	43.15
KRH06275	Soybean	peroxisome	37.39	42.79
TraesCS2A01G113800.1	Wheat	plastid	33.48	36.84
CDY49893	Canola	cytosol	30.43	36.65
TraesCS2B01G132800.1	Wheat	plastid	33.91	36.45
HORVU2Hr1G019720.1	Barley	plastid	33.04	36.36
EER99890	Sorghum	plastid	31.74	35.96
TraesCS2D01G114400.1	Wheat	plastid	33.48	35.65
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	37.39	35.39
CDY45367	Canola	cytosol	23.48	35.06
Os07t0672600-00	Rice	plastid	34.78	34.93
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	37.39	34.4
HORVU6Hr1G081400.1	Barley	mitochondrion	36.96	33.6
TraesCS4D01G168500.1	Wheat	mitochondrion	37.39	33.33
Zm00001d029119_P001	Maize	mitochondrion	34.78	32.39
KXG39402	Sorghum	mitochondrion	35.22	31.4
CDY41119	Canola	cytosol	26.96	29.52
CDY37567	Canola	cytosol	26.96	29.52
CDY62435	Canola	cytosol	24.35	28.72
CDY07714	Canola	cytosol	24.35	28.72
CDX91482	Canola	cytosol	24.35	28.72
CDY60759	Canola	cytosol	23.91	28.21
CDY62436	Canola	cytosol	23.48	27.55
CDY18377	Canola	cytosol	23.48	27.55
CDY07715	Canola	cytosol	23.48	27.55
CDX93313	Canola	cytosol	23.04	27.04
CDY58464	Canola	cytosol	22.61	24.41
CDX75845	Canola	cytosol	22.61	24.41
CDY30113	Canola	cytosol	22.61	23.74
CDX87294	Canola	cytosol	25.65	22.96
GSMUA_Achr3P24000_001	Banana	nucleus	35.22	9.81

Protein Annotations

EnsemblPlants:CDY33238	EnsemblPlantsGene:GSBRNA2T00053997001	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF30	PFAM:PF04525	ProteinID:CDY33238
ProteinID:CDY33238.1	SUPFAM:SSF54518	UniParc:UPI0004EEBC66	UniProt:A0A078H8R0	MapMan:35.1	:

Description

BnaC01g37110DBnaC01g37110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8R0]

Coordinates

chrLK032309:+:275219..276000

Molecular Weight (calculated)

26340.6 Da

IEP (calculated)

8.882

GRAVY (calculated)

-0.477

Length

230 amino acids

Sequence
(BLAST)

001: MQIFRRPCET KAWQNRICPA ETMVKIHPDR KTLGTGEETS SPYLTTEKES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLHGRVLL
101: TLRRQKFGLF KTWEGYRSPT GTAESATNLD YFRVKNNMFK IPSKDSSSSY RVTTGSCRND EEYCYKMVTR GSSLGIEESC GRLVAEVKRK QSRNGLELGD
201: DVLTMMVESQ VDHSFIIGLV LTHSLINCKL

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.