Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24068 | Canola | peroxisome | 72.79 | 49.25 |
| CDY71164 | Canola | cytosol, extracellular, peroxisome | 66.91 | 47.4 |
| CDY24067 | Canola | cytosol | 67.65 | 45.77 |
| CDY24069 | Canola | cytosol | 53.68 | 41.71 |
| CDY36610 | Canola | cytosol | 38.24 | 35.14 |
| AT1G53875.1 | Thale cress | cytosol, mitochondrion, nucleus, peroxisome | 58.09 | 34.65 |
| AT1G53870.3 | Thale cress | cytosol, nucleus, peroxisome | 51.47 | 32.26 |
| CDX82489 | Canola | cytosol | 47.79 | 28.26 |
| CDX75761 | Canola | cytosol | 47.06 | 27.83 |
| CDY33238 | Canola | cytosol, peroxisome, plastid | 47.06 | 27.83 |
| CDY67855 | Canola | peroxisome | 46.32 | 27.39 |
| AT1G53890.3 | Thale cress | cytosol | 46.32 | 25.93 |
| CDY45367 | Canola | cytosol | 28.68 | 25.32 |
| CDY49893 | Canola | cytosol | 32.35 | 23.04 |
| KRH06275 | Soybean | peroxisome | 30.88 | 20.9 |
| KRH47711 | Soybean | peroxisome | 30.15 | 20.81 |
| TraesCS2A01G113800.1 | Wheat | plastid | 30.88 | 20.1 |
| HORVU2Hr1G019720.1 | Barley | plastid | 30.88 | 20.1 |
| TraesCS2B01G132800.1 | Wheat | plastid | 31.62 | 20.09 |
| EER99890 | Sorghum | plastid | 29.41 | 19.7 |
| TraesCS2D01G114400.1 | Wheat | plastid | 30.88 | 19.44 |
| Os07t0672600-00 | Rice | plastid | 29.41 | 17.47 |
| Zm00001d029119_P001 | Maize | mitochondrion | 28.68 | 15.79 |
| TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 27.94 | 15.64 |
| HORVU6Hr1G081400.1 | Barley | mitochondrion | 28.68 | 15.41 |
| TraesCS4B01G155500.1 | Wheat | cytosol, mitochondrion | 27.94 | 15.2 |
| KXG39402 | Sorghum | mitochondrion | 28.68 | 15.12 |
| TraesCS4D01G168500.1 | Wheat | mitochondrion | 27.94 | 14.73 |
| CDX91482 | Canola | cytosol | 20.59 | 14.36 |
| CDY60759 | Canola | cytosol | 20.59 | 14.36 |
| CDY62435 | Canola | cytosol | 19.85 | 13.85 |
| CDY07714 | Canola | cytosol | 19.85 | 13.85 |
| CDY41119 | Canola | cytosol | 20.59 | 13.33 |
| CDY37567 | Canola | cytosol | 20.59 | 13.33 |
| CDX93313 | Canola | cytosol | 19.12 | 13.27 |
| CDY07715 | Canola | cytosol | 19.12 | 13.27 |
| CDY62436 | Canola | cytosol | 19.12 | 13.27 |
| CDY18377 | Canola | cytosol | 19.12 | 13.27 |
| CDY58464 | Canola | cytosol | 17.65 | 11.27 |
| CDX75845 | Canola | cytosol | 17.65 | 11.27 |
| CDY30113 | Canola | cytosol | 17.65 | 10.96 |
| CDX87294 | Canola | cytosol | 19.12 | 10.12 |
| GSMUA_Achr3P24000_001 | Banana | nucleus | 40.44 | 6.66 |
Protein Annotations
| EnsemblPlants:CDY36612 | EnsemblPlantsGene:GSBRNA2T00062320001 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF30 | PFAM:PF04525 | ProteinID:CDY36612 |
| ProteinID:CDY36612.1 | SUPFAM:SSF54518 | UniParc:UPI0004EB9045 | UniProt:A0A078HFN5 | MapMan:35.1 | : |
Description
BnaC06g06650DBnaC06g06650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFN5]
Coordinates
chrLK032379:+:147613..148023
Molecular Weight (calculated)
15177.9 Da
IEP (calculated)
4.496
GRAVY (calculated)
-0.169
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQIHPVQAV PVDSGVGEVK SSPYVTTEQE SFTIWMRSLV YHSKGCTVYD SKGNLIYQVD NYDSKSCGEV YLMDLYGEVL FEFQQSFGLF AKDATQPDNA
101: YGLLKCKLCS FGSEIDSLCK CSAVNESTQT FKGQYI
101: YGLLKCKLCS FGSEIDSLCK CSAVNESTQT FKGQYI
001: MQIYSNNRTM RTKFSLNLIS PAKNMVKIHP DKAFPVDFSV GEGKTSPYLT TEKESFTIWM RSLVFHSKGC TVFDSKGNLI YRVDNYNSKS CSEVYLMDLY
101: GKILFTLRQK KLGLFKSWKG YNSTGTRFQL RKNFKILPKG SSSSYKVVMG SRIVDGDHQS CYKIVKRKSV FTIEDGSGRL LAEVKKKQSN IKSLDLGKDV
201: LTMMVEPQVD HSLIMGIVIA YSLLKCKL
101: GKILFTLRQK KLGLFKSWKG YNSTGTRFQL RKNFKILPKG SSSSYKVVMG SRIVDGDHQS CYKIVKRKSV FTIEDGSGRL LAEVKKKQSN IKSLDLGKDV
201: LTMMVEPQVD HSLIMGIVIA YSLLKCKL
Arabidopsis Description
LURP-one-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AWJ7]
SUBAcon: [cytosol,nucleus,peroxisome,mitochondrion]
SUBAcon: [cytosol,nucleus,peroxisome,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.