Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- extracellular 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24068 | Canola | peroxisome | 94.27 | 90.05 |
| CDY36610 | Canola | cytosol | 68.23 | 88.51 |
| CDY24069 | Canola | cytosol | 79.69 | 87.43 |
| CDY24067 | Canola | cytosol | 89.06 | 85.07 |
| CDY36612 | Canola | cytosol | 47.4 | 66.91 |
| AT1G53875.1 | Thale cress | cytosol, mitochondrion, nucleus, peroxisome | 75.0 | 63.16 |
| AT1G53870.3 | Thale cress | cytosol, nucleus, peroxisome | 70.31 | 62.21 |
| AT1G53890.3 | Thale cress | cytosol | 62.5 | 49.38 |
| CDY33238 | Canola | cytosol, peroxisome, plastid | 56.77 | 47.39 |
| CDX75761 | Canola | cytosol | 56.25 | 46.96 |
| CDX82489 | Canola | cytosol | 55.73 | 46.52 |
| CDY67855 | Canola | peroxisome | 54.69 | 45.65 |
| KRH47711 | Soybean | peroxisome | 40.62 | 39.59 |
| KRH06275 | Soybean | peroxisome | 41.15 | 39.3 |
| CDY49893 | Canola | cytosol | 33.85 | 34.03 |
| TraesCS2A01G113800.1 | Wheat | plastid | 36.98 | 33.97 |
| TraesCS2B01G132800.1 | Wheat | plastid | 37.5 | 33.64 |
| HORVU2Hr1G019720.1 | Barley | plastid | 36.46 | 33.49 |
| EER99890 | Sorghum | plastid | 34.9 | 33.0 |
| TraesCS2D01G114400.1 | Wheat | plastid | 36.98 | 32.87 |
| Os07t0672600-00 | Rice | plastid | 36.46 | 30.57 |
| CDY45367 | Canola | cytosol | 23.96 | 29.87 |
| TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 33.85 | 26.75 |
| CDY60759 | Canola | cytosol | 27.08 | 26.67 |
| CDX91482 | Canola | cytosol | 26.56 | 26.15 |
| HORVU6Hr1G081400.1 | Barley | mitochondrion | 34.38 | 26.09 |
| TraesCS4B01G155500.1 | Wheat | cytosol, mitochondrion | 33.85 | 26.0 |
| Zm00001d029119_P001 | Maize | mitochondrion | 32.81 | 25.51 |
| TraesCS4D01G168500.1 | Wheat | mitochondrion | 33.85 | 25.19 |
| CDY07715 | Canola | cytosol | 25.0 | 24.49 |
| CDY18377 | Canola | cytosol | 25.0 | 24.49 |
| CDY62436 | Canola | cytosol | 25.0 | 24.49 |
| KXG39402 | Sorghum | mitochondrion | 32.81 | 24.42 |
| CDY07714 | Canola | cytosol | 24.48 | 24.1 |
| CDY62435 | Canola | cytosol | 24.48 | 24.1 |
| CDX93313 | Canola | cytosol | 24.48 | 23.98 |
| CDY41119 | Canola | cytosol | 24.48 | 22.38 |
| CDY37567 | Canola | cytosol | 24.48 | 22.38 |
| CDX75845 | Canola | cytosol | 22.92 | 20.66 |
| CDY58464 | Canola | cytosol | 22.92 | 20.66 |
| CDY30113 | Canola | cytosol | 22.92 | 20.09 |
| CDX87294 | Canola | cytosol | 22.92 | 17.12 |
| GSMUA_Achr3P24000_001 | Banana | nucleus | 38.02 | 8.84 |
Protein Annotations
| EnsemblPlants:CDY71164 | EnsemblPlantsGene:GSBRNA2T00011772001 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF30 | PFAM:PF04525 | ProteinID:CDY71164 |
| ProteinID:CDY71164.1 | SUPFAM:SSF54518 | UniParc:UPI0004EDD74F | UniProt:A0A078JWN2 | MapMan:35.1 | : |
Description
BnaCnng71660DBnaCnng71660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWN2]
Coordinates
chrLK044733:+:1159..1833
Molecular Weight (calculated)
21907.3 Da
IEP (calculated)
8.351
GRAVY (calculated)
-0.328
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQIHPVQTL PVDSGVREVK SSPYVTTEQE SFTIWMRSLV CHSKGCTVYD SKGNLIYRVD NYDSKSCGEV YLMDLYREVL FEFQQRCNSN GTRFRLRKNF
101: KISPRGSSSS YKAVMESSKD DQQSCYKILN HRSVFIIEDG SGRLMAEVKK KQSNVNGLDF GEDVLTMVVE PQVDHSFIMG IVIAYGLLKC KL
101: KISPRGSSSS YKAVMESSKD DQQSCYKILN HRSVFIIEDG SGRLMAEVKK KQSNVNGLDF GEDVLTMVVE PQVDHSFIMG IVIAYGLLKC KL
001: MQIYSNNRTM RTKFSLNLIS PAKNMVKIHP DKAFPVDFSV GEGKTSPYLT TEKESFTIWM RSLVFHSKGC TVFDSKGNLI YRVDNYNSKS CSEVYLMDLY
101: GKILFTLRQK KLGLFKSWKG YNSTGTRFQL RKNFKILPKG SSSSYKVVMG SRIVDGDHQS CYKIVKRKSV FTIEDGSGRL LAEVKKKQSN IKSLDLGKDV
201: LTMMVEPQVD HSLIMGIVIA YSLLKCKL
101: GKILFTLRQK KLGLFKSWKG YNSTGTRFQL RKNFKILPKG SSSSYKVVMG SRIVDGDHQS CYKIVKRKSV FTIEDGSGRL LAEVKKKQSN IKSLDLGKDV
201: LTMMVEPQVD HSLIMGIVIA YSLLKCKL
Arabidopsis Description
LURP-one-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AWJ7]
SUBAcon: [mitochondrion,peroxisome,nucleus,cytosol]
SUBAcon: [mitochondrion,peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.