CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 7
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G113800.1	Wheat	plastid	59.61	57.89
HORVU2Hr1G019720.1	Barley	plastid	59.61	57.89
TraesCS2B01G132800.1	Wheat	plastid	60.1	57.01
TraesCS2D01G114400.1	Wheat	plastid	60.59	56.94
Os07t0672600-00	Rice	plastid	60.1	53.28
VIT_02s0025g03730.t01	Wine grape	cytosol	43.84	44.06
VIT_02s0025g03740.t01	Wine grape	plastid	43.84	43.2
VIT_02s0025g03750.t01	Wine grape	cytosol	44.34	42.86
KXG39402	Sorghum	mitochondrion	53.2	41.86
KRH27952	Soybean	cytosol	39.41	41.45
PGSC0003DMT400032165	Potato	cytosol	34.98	41.04
EES04157	Sorghum	plastid	39.9	40.3
KRH77515	Soybean	cytosol	38.42	40.21
Solyc08g080760.1.1	Tomato	mitochondrion	38.42	39.2
KRH59852	Soybean	cytosol	37.44	38.78
Bra027804.1-P	Field mustard	cytosol	36.45	38.74
CDY49893	Canola	cytosol	35.96	38.22
Solyc08g080770.2.1	Tomato	plastid	39.9	38.21
PGSC0003DMT400007876	Potato	plastid	37.44	37.81
PGSC0003DMT400032166	Potato	plastid	38.92	37.26
KRH47711	Soybean	peroxisome	35.96	37.06
Solyc12g056310.1.1	Tomato	plastid	35.96	37.06
Solyc08g080750.2.1	Tomato	plastid	36.45	36.63
KRH06275	Soybean	peroxisome	35.47	35.82
EES04156	Sorghum	plastid	37.93	35.81
CDY45367	Canola	cytosol	27.09	35.71
PGSC0003DMT400010898	Potato	cytosol	22.17	35.43
EES02017	Sorghum	cytosol, mitochondrion, plastid	37.93	35.0
KRH41152	Soybean	cytosol	25.62	34.9
CDY71164	Canola	cytosol, extracellular, peroxisome	33.0	34.9
PGSC0003DMT400014913	Potato	plastid	35.47	34.62
EES04155	Sorghum	cytosol	36.95	34.4
Bra021544.1-P	Field mustard	cytosol	34.98	34.13
PGSC0003DMT400012847	Potato	cytosol	22.17	34.09
AT1G63410.2	Thale cress	cytosol	35.96	33.95
CDY24068	Canola	peroxisome	33.5	33.83
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	33.5	33.83
Bra039696.1-P	Field mustard	cytosol	33.5	33.83
Solyc08g007980.2.1	Tomato	plastid	34.48	33.65
CDY24067	Canola	cytosol	33.0	33.33
Bra039698.1-P	Field mustard	cytosol	33.0	33.33
Bra001544.1-P	Field mustard	cytosol	33.99	33.17
CDY33238	Canola	cytosol, peroxisome, plastid	35.96	31.74
CDY67855	Canola	peroxisome	34.98	30.87
CDX82489	Canola	cytosol	33.99	30.0
AT3G14260.1	Thale cress	cytosol	33.99	30.0
AT1G53870.3	Thale cress	cytosol, nucleus, peroxisome	32.02	29.95
CDY24069	Canola	cytosol	25.62	29.71
CDX75761	Canola	cytosol	33.5	29.57
CDY36612	Canola	cytosol	19.7	29.41
CDY36610	Canola	cytosol	21.18	29.05
AT1G53875.1	Thale cress	cytosol, mitochondrion, nucleus, peroxisome	31.53	28.07
EES19708	Sorghum	plastid	28.57	25.89
EES01655	Sorghum	cytosol	26.11	25.36
EES09153	Sorghum	cytosol	29.06	25.32
EES15617	Sorghum	cytosol	28.57	25.22
EES16590	Sorghum	cytosol	26.11	23.56
AT1G53890.3	Thale cress	cytosol	27.59	23.05
EES16588	Sorghum	cytosol, nucleus, plastid	27.09	22.92
EES09152	Sorghum	plastid	28.08	22.8
EES03690	Sorghum	cytosol	23.65	21.52
EES18481	Sorghum	cytosol	24.63	20.75
EES09156	Sorghum	plastid	25.12	20.08
EES09154	Sorghum	plastid	27.09	19.23
EES15616	Sorghum	plastid	28.08	18.27
GSMUA_Achr3P24000_001	Banana	nucleus	42.86	10.53

Protein Annotations

EnsemblPlants:EER99890	EnsemblPlantsGene:SORBI_3002G413100	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF51	PFAM:PF04525	ProteinID:EER99890
ProteinID:EER99890.1	RefSeq:XP_002463369.1	SEG:seg	SUPFAM:SSF54518	UniParc:UPI0001A847DF	UniProt:C5X4Y9
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:76085975..76086714

Molecular Weight (calculated)

22129.7 Da

IEP (calculated)

9.218

GRAVY (calculated)

-0.162

Length

203 amino acids

Sequence
(BLAST)

001: MAPRVHSSSP TTTTAAPSSP TPTCTGERRK AVFTVWMKSL VLNGHGCTVY DSDGGIVYRV DNYGSARCGG GGGVCLMDLH GTVVLNIVKR RLTFGRWRWP
101: GQKPWFTVTR PCSPFRWRSP PTSSCEFWCD DTGRVRRYTI TGKQECRIVD SSTGLAVAEA KRKTTVCGVA LGEDVLSLAV EPHADPSLVM GLLLVHGLMN
201: HTM

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.