Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33238 | Canola | cytosol, peroxisome, plastid | 84.78 | 84.78 |
| Bra001544.1-P | Field mustard | cytosol | 75.22 | 83.17 |
| Bra021544.1-P | Field mustard | cytosol | 74.78 | 82.69 |
| CDX82489 | Canola | cytosol | 82.61 | 82.61 |
| CDY67855 | Canola | peroxisome | 82.17 | 82.17 |
| CDX75761 | Canola | cytosol | 80.87 | 80.87 |
| AT1G53875.1 | Thale cress | cytosol, mitochondrion, nucleus, peroxisome | 60.87 | 61.4 |
| AT1G53870.3 | Thale cress | cytosol, nucleus, peroxisome | 56.52 | 59.91 |
| AT1G53890.3 | Thale cress | cytosol | 50.87 | 48.15 |
| KRH06275 | Soybean | peroxisome | 37.83 | 43.28 |
| KRH47711 | Soybean | peroxisome | 36.52 | 42.64 |
| TraesCS2A01G113800.1 | Wheat | plastid | 33.04 | 36.36 |
| TraesCS2B01G132800.1 | Wheat | plastid | 33.48 | 35.98 |
| HORVU2Hr1G019720.1 | Barley | plastid | 32.61 | 35.89 |
| TraesCS2D01G114400.1 | Wheat | plastid | 33.04 | 35.19 |
| AT1G63410.2 | Thale cress | cytosol | 32.61 | 34.88 |
| TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 36.52 | 34.57 |
| Os07t0672600-00 | Rice | plastid | 34.35 | 34.5 |
| EER99890 | Sorghum | plastid | 30.0 | 33.99 |
| TraesCS4B01G155500.1 | Wheat | cytosol, mitochondrion | 36.52 | 33.6 |
| HORVU6Hr1G081400.1 | Barley | mitochondrion | 36.52 | 33.2 |
| TraesCS4D01G168500.1 | Wheat | mitochondrion | 36.52 | 32.56 |
| Zm00001d029119_P001 | Maize | mitochondrion | 34.35 | 31.98 |
| KXG39402 | Sorghum | mitochondrion | 34.35 | 30.62 |
| AT2G38640.1 | Thale cress | cytosol | 22.61 | 26.53 |
| AT1G80120.1 | Thale cress | cytosol | 22.61 | 24.76 |
| AT5G41590.1 | Thale cress | cytosol | 21.74 | 22.62 |
| AT3G15810.1 | Thale cress | cytosol | 20.87 | 21.82 |
| GSMUA_Achr3P24000_001 | Banana | nucleus | 33.91 | 9.44 |
Protein Annotations
| Gene3D:3.20.90.20 | MapMan:35.1 | EntrezGene:820646 | UniProt:A0A178VCK0 | ProteinID:AEE75495.1 | ArrayExpress:AT3G14260 |
| EnsemblPlantsGene:AT3G14260 | RefSeq:AT3G14260 | TAIR:AT3G14260 | RefSeq:AT3G14260-TAIR-G | EnsemblPlants:AT3G14260.1 | TAIR:AT3G14260.1 |
| EMBL:AY600570 | ProteinID:BAB01032.1 | EMBL:DQ056592 | GO:GO:0005575 | InterPro:IPR025659 | InterPro:IPR038595 |
| InterPro:LOR | InterPro:LOR_sf | RefSeq:NP_188043.2 | ProteinID:OAP03398.1 | PFAM:PF04525 | PANTHER:PTHR31087 |
| PANTHER:PTHR31087:SF30 | UniProt:Q9LUM1 | SUPFAM:SSF54518 | InterPro:Tubby-like_C | UniParc:UPI000009F9F5 | : |
Description
Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
Coordinates
chr3:-:4747769..4748859
Molecular Weight (calculated)
26281.4 Da
IEP (calculated)
8.454
GRAVY (calculated)
-0.349
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.