Factsheet for Bra001544.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82489	Canola	cytosol	99.52	90.0
CDX75761	Canola	cytosol	98.56	89.13
Bra021544.1-P	Field mustard	cytosol	82.69	82.69
AT3G14260.1	Thale cress	cytosol	83.17	75.22
Bra039698.1-P	Field mustard	cytosol	55.29	57.21
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	54.81	56.72
Bra039696.1-P	Field mustard	cytosol	54.33	56.22
KRH47711	Soybean	peroxisome	40.87	43.15
KRH06275	Soybean	peroxisome	41.35	42.79
TraesCS2A01G113800.1	Wheat	plastid	38.46	38.28
Bra027804.1-P	Field mustard	cytosol	35.1	38.22
TraesCS2B01G132800.1	Wheat	plastid	38.94	37.85
HORVU2Hr1G019720.1	Barley	plastid	37.98	37.8
TraesCS2D01G114400.1	Wheat	plastid	38.46	37.04
Os07t0672600-00	Rice	plastid	37.98	34.5
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	39.9	34.16
EER99890	Sorghum	plastid	33.17	33.99
HORVU6Hr1G081400.1	Barley	mitochondrion	40.38	33.2
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	39.9	33.2
TraesCS4D01G168500.1	Wheat	mitochondrion	39.9	32.17
Zm00001d029119_P001	Maize	mitochondrion	37.02	31.17
KXG39402	Sorghum	mitochondrion	37.98	30.62
Bra005092.1-P	Field mustard	cytosol	26.92	28.72
Bra000080.1-P	Field mustard	cytosol	26.44	28.21
Bra000079.1-P	Field mustard	cytosol	25.96	27.55
Bra017111.1-P	Field mustard	cytosol	25.48	27.04
Bra008497.1-P	Field mustard	cytosol	26.92	26.67
Bra001606.1-P	Field mustard	cytosol	23.56	23.0
Bra025487.1-P	Field mustard	cytosol	24.52	22.87
Bra025486.1-P	Field mustard	cytosol	24.52	22.87
Bra027206.1-P	Field mustard	cytosol	24.04	22.83
Bra035195.1-P	Field mustard	cytosol	22.6	22.38
GSMUA_Achr3P24000_001	Banana	nucleus	37.5	9.44

Protein Annotations

EnsemblPlants:Bra001544.1	EnsemblPlants:Bra001544.1-P	EnsemblPlantsGene:Bra001544	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF30	PFAM:PF04525
SUPFAM:SSF54518	UniParc:UPI0002540968	UniProt:M4CBG4	MapMan:35.1	:	:

Description

AT3G14260 (E=1e-096) | unknown protein

Coordinates

chrA03:-:16935192..16935931

Molecular Weight (calculated)

23710.2 Da

IEP (calculated)

9.459

GRAVY (calculated)

-0.422

Length

208 amino acids

Sequence
(BLAST)

001: MVKIHPDHTT SGAGDITSSP YLTTEKESFT IWMKSLVFNT NGCTVFDSKG NIIYRVDNYN SKSCREVYLM DLHGHVLFTL RSQKFGLFKT WEGYRSPSGT
101: SDSTTNSEYF RVKSNIFQVP SKDSYSSYRV LTGSCRKNEQ YHYKMVTRGS SLGIEDICGR VVAEVKRKQS RKGLEFGDDV LTMVVESQVD HSFIIGLVLT
201: HRLINRKL

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.