Factsheet for Bra039698.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	peroxisome
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24067	Canola	cytosol	100.0	100.0
Bra039696.1-P	Field mustard	cytosol	92.04	92.04
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	90.55	90.55
AT1G53875.1	Thale cress	cytosol, mitochondrion, nucleus, peroxisome	74.63	65.79
AT1G53870.3	Thale cress	cytosol, nucleus, peroxisome	69.15	64.06
Bra001544.1-P	Field mustard	cytosol	57.21	55.29
Bra021544.1-P	Field mustard	cytosol	56.22	54.33
AT1G53890.3	Thale cress	cytosol	58.21	48.15
KRH47711	Soybean	peroxisome	40.3	41.12
KRH06275	Soybean	peroxisome	40.8	40.8
TraesCS2A01G113800.1	Wheat	plastid	38.81	37.32
TraesCS2B01G132800.1	Wheat	plastid	39.3	36.92
HORVU2Hr1G019720.1	Barley	plastid	38.31	36.84
TraesCS2D01G114400.1	Wheat	plastid	39.3	36.57
Bra027804.1-P	Field mustard	cytosol	34.33	36.13
EER99890	Sorghum	plastid	33.33	33.0
Os07t0672600-00	Rice	plastid	37.31	32.75
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	35.32	29.22
HORVU6Hr1G081400.1	Barley	mitochondrion	35.82	28.46
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	35.32	28.4
Zm00001d029119_P001	Maize	mitochondrion	33.83	27.53
TraesCS4D01G168500.1	Wheat	mitochondrion	35.32	27.52
Bra005092.1-P	Field mustard	cytosol	25.87	26.67
KXG39402	Sorghum	mitochondrion	33.83	26.36
Bra017111.1-P	Field mustard	cytosol	25.37	26.02
Bra000079.1-P	Field mustard	cytosol	24.88	25.51
Bra000080.1-P	Field mustard	cytosol	24.38	25.13
Bra008497.1-P	Field mustard	cytosol	23.88	22.86
Bra001606.1-P	Field mustard	cytosol	23.38	22.07
Bra027206.1-P	Field mustard	cytosol	23.38	21.46
Bra025486.1-P	Field mustard	cytosol	23.38	21.08
Bra025487.1-P	Field mustard	cytosol	23.38	21.08
Bra035195.1-P	Field mustard	cytosol	21.39	20.48
GSMUA_Achr3P24000_001	Banana	nucleus	38.31	9.32

Protein Annotations

EnsemblPlants:Bra039698.1	EnsemblPlants:Bra039698.1-P	EnsemblPlantsGene:Bra039698	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF30	PFAM:PF04525
SUPFAM:SSF54518	UniParc:UPI000253E776	UniProt:M4FF26	MapMan:35.1	:	:

Description

AT1G53880 (E=2e-072) | GTP binding / translation initiation factor

Coordinates

chrA06:-:488018..488623

Molecular Weight (calculated)

22704.2 Da

IEP (calculated)

8.565

GRAVY (calculated)

-0.290

Length

201 amino acids

Sequence
(BLAST)

001: MVQIHPVQAL SVVSGAGEEK SSPYVATEQQ SFTIWMRSLV YHSKGCTVYD SKGNLIYRVD NYDSKSCGEV YLMDLYGEVL FEFQQKFGLF KSCEGYNSTG
101: TRFRLRKNFK ISPRGSSSSY KVVMESNKDD RQSCYKILNH ASVFTIEDGS GRFMAEVKKK RSNVNGLDFG EDVLTMVVEP QVDHSFIMGI VIAYGLLKSK
201: L

Best Arabidopsis Sequence Match ( AT1G53875.1 )
(BLAST)

001: MQIYSNNRTM RTKFSLNLIS PAKNMVKIHP DKAFPVDFSV GEGKTSPYLT TEKESFTIWM RSLVFHSKGC TVFDSKGNLI YRVDNYNSKS CSEVYLMDLY
101: GKILFTLRQK KLGLFKSWKG YNSTGTRFQL RKNFKILPKG SSSSYKVVMG SRIVDGDHQS CYKIVKRKSV FTIEDGSGRL LAEVKKKQSN IKSLDLGKDV
201: LTMMVEPQVD HSLIMGIVIA YSLLKCKL

Arabidopsis Description

LURP-one-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AWJ7]
SUBAcon: [cytosol,nucleus,peroxisome,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.