Factsheet for TraesCS2B01G132800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G114400.1	Wheat	plastid	97.66	96.76
TraesCS2A01G113800.1	Wheat	plastid	94.39	96.65
HORVU2Hr1G019720.1	Barley	plastid	93.46	95.69
Os07t0672600-00	Rice	plastid	66.82	62.45
EER99890	Sorghum	plastid	57.01	60.1
VIT_02s0025g03730.t01	Wine grape	cytosol	43.93	46.53
VIT_02s0025g03740.t01	Wine grape	plastid	43.93	45.63
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	52.34	44.8
VIT_02s0025g03750.t01	Wine grape	cytosol	43.93	44.76
PGSC0003DMT400032165	Potato	cytosol	34.11	42.2
KRH27952	Soybean	cytosol	37.85	41.97
KRH77515	Soybean	cytosol	37.85	41.75
TraesCS3B01G487000.1	Wheat	plastid	37.85	41.33
TraesCS3B01G487200.1	Wheat	cytosol	37.85	41.33
KRH47711	Soybean	peroxisome	37.38	40.61
Solyc08g080770.2.1	Tomato	plastid	40.19	40.57
KRH59852	Soybean	cytosol	36.92	40.31
PGSC0003DMT400007876	Potato	plastid	37.85	40.3
Solyc08g080760.1.1	Tomato	mitochondrion	37.38	40.2
PGSC0003DMT400032166	Potato	plastid	39.72	40.09
KRH06275	Soybean	peroxisome	37.38	39.8
Bra039698.1-P	Field mustard	cytosol	36.92	39.3
CDY24067	Canola	cytosol	36.92	39.3
TraesCS3B01G486300.1	Wheat	plastid	35.98	39.29
TraesCS3B01G486900.1	Wheat	cytosol, plastid	35.98	39.29
CDY49893	Canola	cytosol	35.05	39.27
Bra027804.1-P	Field mustard	cytosol	35.05	39.27
Solyc08g080750.2.1	Tomato	plastid	36.92	39.11
Solyc12g056310.1.1	Tomato	plastid	35.98	39.09
Bra001544.1-P	Field mustard	cytosol	37.85	38.94
CDY24068	Canola	peroxisome	36.45	38.81
TraesCS3B01G486200.1	Wheat	plastid	35.98	38.69
PGSC0003DMT400014913	Potato	plastid	36.92	37.98
Bra039696.1-P	Field mustard	cytosol	35.51	37.81
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	35.51	37.81
PGSC0003DMT400010898	Potato	cytosol	22.43	37.8
CDY71164	Canola	cytosol, extracellular, peroxisome	33.64	37.5
TraesCS3B01G486800.1	Wheat	plastid	38.78	36.73
TraesCS3B01G486600.1	Wheat	cytosol	33.64	36.55
Solyc08g007980.2.1	Tomato	plastid	35.51	36.54
CDY45367	Canola	cytosol	26.17	36.36
Bra021544.1-P	Field mustard	cytosol	35.05	36.06
KRH41152	Soybean	cytosol	24.77	35.57
CDX82489	Canola	cytosol	37.85	35.22
AT1G63410.2	Thale cress	cytosol	35.05	34.88
CDY24069	Canola	cytosol	28.5	34.86
CDX75761	Canola	cytosol	37.38	34.78
AT1G53870.3	Thale cress	cytosol, nucleus, peroxisome	35.05	34.56
TraesCS3B01G487100.1	Wheat	plastid	33.64	34.45
CDY33238	Canola	cytosol, peroxisome, plastid	36.45	33.91
AT3G14260.1	Thale cress	cytosol	35.98	33.48
PGSC0003DMT400012847	Potato	cytosol	20.56	33.33
CDY67855	Canola	peroxisome	35.05	32.61
AT1G53875.1	Thale cress	cytosol, mitochondrion, nucleus, peroxisome	34.58	32.46
CDY36610	Canola	cytosol	22.43	32.43
CDY36612	Canola	cytosol	20.09	31.62
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	30.37	31.25
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	27.57	29.06
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	27.1	28.29
TraesCS3B01G372400.1	Wheat	plastid	26.17	27.18
TraesCS5B01G144000.1	Wheat	cytosol	27.57	25.88
AT1G53890.3	Thale cress	cytosol	27.57	24.28
TraesCS3B01G340800.1	Wheat	cytosol	24.3	23.64
TraesCS4B01G396800.1	Wheat	plastid	23.36	23.58
TraesCS5B01G143600.1	Wheat	mitochondrion	26.64	22.98
TraesCS5B01G143700.1	Wheat	plastid	28.04	22.73
TraesCS4B01G123400.1	Wheat	cytosol	24.77	21.72
TraesCS1B01G341900.1	Wheat	cytosol	23.83	21.7
GSMUA_Achr3P24000_001	Banana	nucleus	46.73	12.11

Protein Annotations

EnsemblPlants:TraesCS2B01G132800.1	EnsemblPlantsGene:TraesCS2B01G132800	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF51	PFAM:PF04525	PFscan:PS51257
SEG:seg	SUPFAM:SSF54518	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2B:+:99266180..99266909

Molecular Weight (calculated)

22982.7 Da

IEP (calculated)

9.307

GRAVY (calculated)

-0.121

Length

214 amino acids

Sequence
(BLAST)

001: MARVHSSPSF PSSSSPAAAA CAGERSGKVF TLWLKSLVLN GRGCTVYDSD GHIVYRVDNY GSKCSDNVCL MDLRGNVVVN IHKKKLAFGK WEGYKWTGRK
101: QEASAWFKVA RPRSGIFHRS GGRPSSSPCE FESDAGCAMR YRIDDDGGAR AGKRACCRIV DAGTGLVVAE VKRKVTAGGV ALGEDVLALV VEPGVDDSLI
201: MGLVLVYGLM NRTM

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.