Factsheet for TraesCS3B01G486600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G486900.1	Wheat	cytosol, plastid	92.89	93.37
TraesCS3A01G449900.1	Wheat	plastid	88.83	89.29
TraesCS3D01G442800.1	Wheat	cytosol, plastid	87.82	86.07
TraesCS3D01G442600.1	Wheat	cytosol	87.31	86.0
TraesCS3A01G449800.1	Wheat	cytosol	82.74	82.74
HORVU3Hr1G097460.1	Barley	mitochondrion, plastid	85.79	79.72
HORVU3Hr1G097400.6	Barley	cytosol, mitochondrion, plastid	86.29	78.7
TraesCS3B01G486300.1	Wheat	plastid	78.17	78.57
TraesCS3B01G486200.1	Wheat	plastid	78.68	77.89
TraesCS3B01G487200.1	Wheat	cytosol	74.11	74.49
TraesCS3B01G487000.1	Wheat	plastid	74.11	74.49
TraesCS3B01G486800.1	Wheat	plastid	75.63	65.93
EES04157	Sorghum	plastid	63.96	62.69
TraesCS3B01G487100.1	Wheat	plastid	66.5	62.68
EES04156	Sorghum	plastid	64.47	59.07
Zm00001d042239_P001	Maize	plastid	63.45	57.08
Zm00001d011926_P001	Maize	cytosol	58.38	56.93
Zm00001d011925_P001	Maize	cytosol	58.88	56.86
Os01t0931600-00	Rice	cytosol	60.91	55.56
EES04155	Sorghum	cytosol	60.91	55.05
TraesCS2B01G132800.1	Wheat	plastid	36.55	33.64
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	35.53	28.0
TraesCS5B01G144000.1	Wheat	cytosol	30.46	26.32
TraesCS3B01G372400.1	Wheat	plastid	27.41	26.21
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	26.9	26.11
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	26.4	25.37
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	26.4	25.0
TraesCS4B01G396800.1	Wheat	plastid	24.87	23.11
TraesCS5B01G143600.1	Wheat	mitochondrion	28.93	22.98
TraesCS4B01G123400.1	Wheat	cytosol	27.92	22.54
TraesCS3B01G340800.1	Wheat	cytosol	22.84	20.45
TraesCS5B01G143700.1	Wheat	plastid	25.89	19.32
TraesCS1B01G341900.1	Wheat	cytosol	21.83	18.3

Protein Annotations

EnsemblPlants:TraesCS3B01G486600.1	EnsemblPlantsGene:TraesCS3B01G486600	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:733002639..733003232

Molecular Weight (calculated)

21230.3 Da

IEP (calculated)

7.768

GRAVY (calculated)

-0.096

Length

197 amino acids

Sequence
(BLAST)

001: MAKIQPLAAA ASPSSSDDQR SQQAYTVWMK SLVFNGNGCT VYGHDGAVAF GVDNYGCRGS REVFFMDRKG KALIRIRRKG FGMFRSWEVC RCTHNGGQEE
101: EATPWFSVQR AEKGGAAVAM HGGTGTCYYT IDGCSAHKSE YSVRGVDGAV VAEVARKQTP AGVVLEEDVL TLTVAPEADH LLFLGLVIVR GLINCSL

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.