Factsheet for TraesCS3B01G486200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G449500.1	Wheat	cytosol	77.39	91.12
TraesCS3D01G442300.1	Wheat	plastid	83.92	86.98
TraesCS3A01G450200.1	Wheat	plastid	85.43	85.86
HORVU3Hr1G097260.1	Barley	cytosol	82.91	85.49
HORVU3Hr1G097270.1	Barley	plastid	82.91	85.49
TraesCS3B01G487000.1	Wheat	plastid	83.42	84.69
TraesCS3B01G486300.1	Wheat	plastid	82.91	84.18
TraesCS3D01G443100.1	Wheat	cytosol, plastid	83.42	83.84
TraesCS3B01G486900.1	Wheat	cytosol, plastid	81.41	82.65
TraesCS3B01G487200.1	Wheat	cytosol	80.4	81.63
TraesCS3B01G486600.1	Wheat	cytosol	77.89	78.68
TraesCS3D01G442400.1	Wheat	cytosol	85.43	77.63
TraesCS3B01G486800.1	Wheat	plastid	84.92	74.78
TraesCS3B01G487100.1	Wheat	plastid	75.38	71.77
EES04157	Sorghum	plastid	64.82	64.18
Zm00001d011926_P001	Maize	cytosol	60.8	59.9
Zm00001d011925_P001	Maize	cytosol	61.31	59.8
Zm00001d042239_P001	Maize	plastid	64.32	58.45
Os01t0931600-00	Rice	cytosol	61.81	56.94
EES04155	Sorghum	cytosol	62.31	56.88
EES04156	Sorghum	plastid	60.8	56.28
TraesCS2B01G132800.1	Wheat	plastid	38.69	35.98
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	38.19	30.4
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	30.15	29.56
TraesCS3B01G372400.1	Wheat	plastid	30.15	29.13
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	29.65	28.78
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	28.14	26.92
TraesCS5B01G144000.1	Wheat	cytosol	30.65	26.75
TraesCS4B01G123400.1	Wheat	cytosol	29.65	24.18
TraesCS3B01G340800.1	Wheat	cytosol	26.63	24.09
TraesCS5B01G143600.1	Wheat	mitochondrion	29.65	23.79
TraesCS4B01G396800.1	Wheat	plastid	25.13	23.58
TraesCS5B01G143700.1	Wheat	plastid	30.15	22.73
TraesCS1B01G341900.1	Wheat	cytosol	24.62	20.85

Protein Annotations

EnsemblPlants:TraesCS3B01G486200.1	EnsemblPlantsGene:TraesCS3B01G486200	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:732841030..732841629

Molecular Weight (calculated)

21469.7 Da

IEP (calculated)

9.589

GRAVY (calculated)

-0.168

Length

199 amino acids

Sequence
(BLAST)

001: MAKIQPLPSS SCSTSSSGDH HQNRQAYTVW MKSLVFNGNG CAVYGPDGAV AFRVDNYGCR GGREVLFMDR AGNALIRIRR KGFGMFRRWE VSRCAHNGHE
101: DEEATPWFSV RRAEKGGAAV TMHGGARTCY RIAGCSGARK PEYTVRGVDG AAVAEVARKQ TAAGVVLGED VLTLTVAPEV DQLLVLGLVV VRGLINRSL

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.