Factsheet for TraesCS3D01G442300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G097260.1	Barley	cytosol	88.02	87.56
HORVU3Hr1G097270.1	Barley	plastid	86.98	86.53
TraesCS3D01G442200.1	Wheat	cytosol, plastid	85.94	84.18
TraesCS3B01G486200.1	Wheat	plastid	86.98	83.92
TraesCS3D01G442600.1	Wheat	cytosol	85.94	82.5
TraesCS3D01G442800.1	Wheat	cytosol, plastid	85.42	81.59
TraesCS3D01G443100.1	Wheat	cytosol, plastid	83.33	80.81
TraesCS3D01G443000.1	Wheat	plastid	81.25	79.19
TraesCS3D01G442400.1	Wheat	cytosol	85.94	75.34
EES04157	Sorghum	plastid	67.71	64.68
TraesCS3D01G442500.1	Wheat	cytosol	74.48	63.84
Zm00001d011926_P001	Maize	cytosol	63.54	60.4
Zm00001d011925_P001	Maize	cytosol	63.02	59.31
EES04156	Sorghum	plastid	66.15	59.07
Zm00001d042239_P001	Maize	plastid	67.19	58.9
Os01t0931600-00	Rice	cytosol	64.58	57.41
EES04155	Sorghum	cytosol	63.54	55.96
TraesCS3D01G442700.1	Wheat	cytosol	50.0	39.67
TraesCS2D01G114400.1	Wheat	plastid	39.58	35.19
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	33.33	31.07
TraesCS4D01G168500.1	Wheat	mitochondrion	41.15	30.62
TraesCS3D01G334200.1	Wheat	cytosol	32.29	30.54
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	32.81	30.29
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	29.69	27.27
TraesCS5D01G147200.1	Wheat	cytosol	32.29	27.19
TraesCS4D01G121500.1	Wheat	cytosol	29.17	22.95
TraesCS5D01G147500.1	Wheat	nucleus	29.69	22.8
TraesCS3D01G306600.1	Wheat	cytosol	25.52	22.37
TraesCS5D01G147400.1	Wheat	plastid	30.21	22.05
TraesCS1D01G330600.1	Wheat	cytosol	25.52	20.76

Protein Annotations

EnsemblPlants:TraesCS3D01G442300.1	EnsemblPlantsGene:TraesCS3D01G442300	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:552424210..552424788

Molecular Weight (calculated)

20635.9 Da

IEP (calculated)

9.313

GRAVY (calculated)

-0.105

Length

192 amino acids

Sequence
(BLAST)

001: MAKIQPLPAA PSPPSSGDHR QGQQAYTVWM KSLVFNGNGC AVYGPDGAVA FRVDNYGCRG GREVFFMDRQ GNALIRIRRK GFGMFRRWEV CRCEDEDATP
101: WFTVRRAGKG GAAVAMHGGA GTCYKIDGCS ASKTEYKVRG VDGAAVAEVA RKQTAAGVVL GEDVLTLTVA PEMDHLLVLG LVVVRGLINR SL

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.