Factsheet for TraesCS3D01G443000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G487000.1	Wheat	plastid	92.39	92.86
TraesCS3A01G450100.1	Wheat	cytosol	88.32	88.78
TraesCS3D01G443100.1	Wheat	cytosol, plastid	82.74	82.32
TraesCS3D01G442300.1	Wheat	plastid	79.19	81.25
TraesCS3D01G442800.1	Wheat	cytosol, plastid	82.23	80.6
TraesCS3D01G442600.1	Wheat	cytosol	80.71	79.5
TraesCS3D01G442200.1	Wheat	cytosol, plastid	78.17	78.57
HORVU3Hr1G097470.1	Barley	plastid	84.26	76.15
TraesCS3D01G442400.1	Wheat	cytosol	82.23	73.97
TraesCS3D01G442500.1	Wheat	cytosol	73.1	64.29
EES04157	Sorghum	plastid	62.94	61.69
Zm00001d011926_P001	Maize	cytosol	59.39	57.92
Os01t0931600-00	Rice	cytosol	62.94	57.41
Zm00001d011925_P001	Maize	cytosol	58.88	56.86
Zm00001d042239_P001	Maize	plastid	62.44	56.16
EES04156	Sorghum	plastid	60.41	55.35
EES04155	Sorghum	cytosol	60.91	55.05
TraesCS3D01G442700.1	Wheat	cytosol	47.21	38.43
TraesCS2D01G114400.1	Wheat	plastid	41.12	37.5
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	30.96	29.61
TraesCS4D01G168500.1	Wheat	mitochondrion	38.07	29.07
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	30.46	28.85
TraesCS3D01G334200.1	Wheat	cytosol	29.44	28.57
TraesCS5D01G147200.1	Wheat	cytosol	31.47	27.19
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	27.92	26.32
TraesCS4D01G121500.1	Wheat	cytosol	29.44	23.77
TraesCS5D01G147400.1	Wheat	plastid	30.96	23.19
TraesCS5D01G147500.1	Wheat	nucleus	28.43	22.4
TraesCS3D01G306600.1	Wheat	cytosol	24.87	22.37
TraesCS1D01G330600.1	Wheat	cytosol	24.87	20.76

Protein Annotations

EnsemblPlants:TraesCS3D01G443000.1	EnsemblPlantsGene:TraesCS3D01G443000	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:552727803..552728396

Molecular Weight (calculated)

21226.6 Da

IEP (calculated)

9.096

GRAVY (calculated)

-0.145

Length

197 amino acids

Sequence
(BLAST)

001: MAKIQPLPSS PCSTSSYGNQ QSSQAYTVWM KSLVFNGNGC AVYGPDGAVA FRVDNYGCRG GREVLFMDRA GNALIRIRRK GFGMFRRWEV SRCAHNGGQD
101: EEATPWFRVR RAEKGGAAVA MHGGAGTCYT MDGCCARKPE YRIRDVDGTV VAEVARKQTT AGVVLGEDVL TLTVGPEVGH LLVLGLVVVR GLMNGSM

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.