Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G486900.1 | Wheat | cytosol, plastid | 90.0 | 91.84 |
| TraesCS3A01G449900.1 | Wheat | plastid | 89.5 | 91.33 |
| TraesCS3D01G442800.1 | Wheat | cytosol, plastid | 91.0 | 90.55 |
| TraesCS3B01G486600.1 | Wheat | cytosol | 86.0 | 87.31 |
| TraesCS3D01G442300.1 | Wheat | plastid | 82.5 | 85.94 |
| TraesCS3A01G449800.1 | Wheat | cytosol | 84.5 | 85.79 |
| TraesCS3D01G443000.1 | Wheat | plastid | 79.5 | 80.71 |
| HORVU3Hr1G097460.1 | Barley | mitochondrion, plastid | 85.5 | 80.66 |
| TraesCS3D01G443100.1 | Wheat | cytosol, plastid | 79.5 | 80.3 |
| TraesCS3D01G442200.1 | Wheat | cytosol, plastid | 78.5 | 80.1 |
| HORVU3Hr1G097400.6 | Barley | cytosol, mitochondrion, plastid | 86.5 | 80.09 |
| TraesCS3D01G442400.1 | Wheat | cytosol | 83.0 | 75.8 |
| TraesCS3D01G442500.1 | Wheat | cytosol | 79.0 | 70.54 |
| EES04157 | Sorghum | plastid | 65.0 | 64.68 |
| Zm00001d011926_P001 | Maize | cytosol | 60.5 | 59.9 |
| Zm00001d042239_P001 | Maize | plastid | 64.0 | 58.45 |
| EES04156 | Sorghum | plastid | 62.5 | 58.14 |
| Zm00001d011925_P001 | Maize | cytosol | 59.0 | 57.84 |
| EES04155 | Sorghum | cytosol | 62.0 | 56.88 |
| Os01t0931600-00 | Rice | cytosol | 61.0 | 56.48 |
| TraesCS3D01G442700.1 | Wheat | cytosol | 49.0 | 40.5 |
| TraesCS2D01G114400.1 | Wheat | plastid | 41.0 | 37.96 |
| TraesCS4D01G168500.1 | Wheat | mitochondrion | 39.0 | 30.23 |
| TraesCS3D01G334400.1 | Wheat | cytosol, extracellular, peroxisome | 30.5 | 29.61 |
| TraesCS3D01G334200.1 | Wheat | cytosol | 30.0 | 29.56 |
| TraesCS3D01G334300.1 | Wheat | cytosol, extracellular, peroxisome | 30.0 | 28.85 |
| TraesCS5D01G147200.1 | Wheat | cytosol | 31.5 | 27.63 |
| TraesCS1D01G303100.1 | Wheat | extracellular, plasma membrane | 28.0 | 26.79 |
| TraesCS3D01G306600.1 | Wheat | cytosol | 26.5 | 24.2 |
| TraesCS4D01G121500.1 | Wheat | cytosol | 28.5 | 23.36 |
| TraesCS5D01G147500.1 | Wheat | nucleus | 29.0 | 23.2 |
| TraesCS1D01G330600.1 | Wheat | cytosol | 27.0 | 22.88 |
| TraesCS5D01G147400.1 | Wheat | plastid | 29.5 | 22.43 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G442600.1 | EnsemblPlantsGene:TraesCS3D01G442600 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF12 | PFAM:PF04525 | SEG:seg |
| SUPFAM:SSF54518 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:552575677..552576279
Molecular Weight (calculated)
21888.4 Da
IEP (calculated)
9.353
GRAVY (calculated)
-0.163
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKIQPLAAA ASLCSSDDHR RQQGRQLAYT VWMKSLVFNG NGCTVYDPDG AVAFRVDNYG CRGGREVFFM DRQGNALIRI RRKGFGMFRR WEVCRCAHNG
101: GQEEEATPWF SVRRAEKGGA TMAMHGGAGT CYTIDGCSAR KSEYRVRGVD GAVVAEVARK QTAAGVVLGE DVLTLKVAPE VDHLLFLGLV VVRGLINRSL
101: GQEEEATPWF SVRRAEKGGA TMAMHGGAGT CYTIDGCSAR KSEYRVRGVD GAVVAEVARK QTAAGVVLGE DVLTLKVAPE VDHLLFLGLV VVRGLINRSL
001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL
Arabidopsis Description
Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.