Factsheet for TraesCS3B01G486900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G486600.1	Wheat	cytosol	93.37	92.89
TraesCS3A01G449900.1	Wheat	plastid	92.86	92.86
TraesCS3D01G442600.1	Wheat	cytosol	91.84	90.0
TraesCS3D01G442800.1	Wheat	cytosol, plastid	91.33	89.05
TraesCS3A01G449800.1	Wheat	cytosol	86.22	85.79
HORVU3Hr1G097460.1	Barley	mitochondrion, plastid	89.8	83.02
HORVU3Hr1G097400.6	Barley	cytosol, mitochondrion, plastid	90.31	81.94
TraesCS3B01G486300.1	Wheat	plastid	81.63	81.63
TraesCS3B01G486200.1	Wheat	plastid	82.65	81.41
TraesCS3B01G487200.1	Wheat	cytosol	78.06	78.06
TraesCS3B01G487000.1	Wheat	plastid	77.55	77.55
TraesCS3B01G486800.1	Wheat	plastid	79.59	69.03
TraesCS3B01G487100.1	Wheat	plastid	70.92	66.51
EES04157	Sorghum	plastid	65.82	64.18
EES04156	Sorghum	plastid	64.8	59.07
Zm00001d011925_P001	Maize	cytosol	61.22	58.82
Zm00001d042239_P001	Maize	plastid	65.31	58.45
Zm00001d011926_P001	Maize	cytosol	60.2	58.42
EES04155	Sorghum	cytosol	63.78	57.34
Os01t0931600-00	Rice	cytosol	60.71	55.09
TraesCS2B01G132800.1	Wheat	plastid	39.29	35.98
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	36.22	28.4
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	28.57	27.59
TraesCS3B01G372400.1	Wheat	plastid	28.57	27.18
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	28.06	26.83
TraesCS5B01G144000.1	Wheat	cytosol	30.61	26.32
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	27.04	25.48
TraesCS5B01G143600.1	Wheat	mitochondrion	31.63	25.0
TraesCS4B01G396800.1	Wheat	plastid	26.02	24.06
TraesCS4B01G123400.1	Wheat	cytosol	29.08	23.36
TraesCS3B01G340800.1	Wheat	cytosol	24.49	21.82
TraesCS5B01G143700.1	Wheat	plastid	28.57	21.21
TraesCS1B01G341900.1	Wheat	cytosol	23.47	19.57

Protein Annotations

EnsemblPlants:TraesCS3B01G486900.1	EnsemblPlantsGene:TraesCS3B01G486900	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:733257074..733257664

Molecular Weight (calculated)

21097.2 Da

IEP (calculated)

8.822

GRAVY (calculated)

-0.118

Length

196 amino acids

Sequence
(BLAST)

001: MAKIQPLAAA ASPSSSDDQR SQQAYTVWMK SLVFNGNGCT VYSPDGAVAF RVDNYGCRGG REVFFMDRKG NALIRIRRKG FGMFRSWEVC RCAHNGGQEE
101: EATQWFSVRR AEKGGAAVAM HGGTGTCYTI DGCSARKSEY SVRGVDGAVV AEVARKQTPA GVVLGEDVLA LTVAPEADHL LFLGLVVVRG LINRSL

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.