Factsheet for TraesCS3B01G486800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G487000.1	Wheat	plastid	77.43	89.29
TraesCS3B01G487100.1	Wheat	plastid	80.53	87.08
TraesCS3B01G486200.1	Wheat	plastid	74.78	84.92
TraesCS3B01G487200.1	Wheat	cytosol	69.47	80.1
TraesCS3B01G486900.1	Wheat	cytosol, plastid	69.03	79.59
HORVU3Hr1G097470.1	Barley	plastid	75.22	77.98
TraesCS3B01G486300.1	Wheat	plastid	66.81	77.04
TraesCS3B01G486600.1	Wheat	cytosol	65.93	75.63
EES04157	Sorghum	plastid	55.31	62.19
Zm00001d011926_P001	Maize	cytosol	53.54	59.9
Zm00001d011925_P001	Maize	cytosol	51.77	57.35
Zm00001d042239_P001	Maize	plastid	54.87	56.62
Os01t0931600-00	Rice	cytosol	53.98	56.48
EES04155	Sorghum	cytosol	54.42	56.42
EES04156	Sorghum	plastid	52.65	55.35
TraesCS2B01G132800.1	Wheat	plastid	36.73	38.78
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	33.63	30.4
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	25.66	28.57
TraesCS3B01G372400.1	Wheat	plastid	25.66	28.16
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	25.22	27.8
TraesCS5B01G144000.1	Wheat	cytosol	26.99	26.75
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	23.89	25.96
TraesCS5B01G143600.1	Wheat	mitochondrion	27.43	25.0
TraesCS5B01G143700.1	Wheat	plastid	29.2	25.0
TraesCS3B01G340800.1	Wheat	cytosol	23.45	24.09
TraesCS4B01G396800.1	Wheat	plastid	22.57	24.06
TraesCS4B01G123400.1	Wheat	cytosol	25.66	23.77
TraesCS1B01G341900.1	Wheat	cytosol	21.24	20.43

Protein Annotations

EnsemblPlants:TraesCS3B01G486800.1	EnsemblPlantsGene:TraesCS3B01G486800	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:733080151..733080831

Molecular Weight (calculated)

24284.2 Da

IEP (calculated)

8.889

GRAVY (calculated)

-0.060

Length

226 amino acids

Sequence
(BLAST)

001: MEPATASAIP IIATAAEQSR AIFFFHLSSM AKIQPHPSSP CSSSSYGNQQ SSQAYTVWMK SLVFNGNGCA VYGPDGAVAF RVDNYGCRGG REVLFMDRAG
101: NALIRIRRKG FGMFRRWEVS RCAQDGGQDE EATPWFSVRR AEKGGAAVVM HGGSGTCYTI EGCCARKAEN RIRDVDGTVV AEVARKQTAA GVVLGEDVLT
201: LTVGPKVDQL LVLGLVVVRG LMNRSL

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.