Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G372600.1 | Wheat | cytosol, extracellular, peroxisome | 97.04 | 96.1 |
| TraesCS3D01G334200.1 | Wheat | cytosol | 96.06 | 96.06 |
| TraesCS3A01G340700.1 | Wheat | cytosol, extracellular, peroxisome | 90.64 | 91.09 |
| HORVU4Hr1G047270.1 | Barley | cytosol, extracellular, peroxisome | 91.13 | 90.69 |
| TraesCS3B01G372400.1 | Wheat | plastid | 89.66 | 88.35 |
| HORVU3Hr1G080430.1 | Barley | plastid | 91.13 | 79.06 |
| Os01t0817650-00 | Rice | cytosol, extracellular, plastid | 76.35 | 72.77 |
| EES01655 | Sorghum | cytosol | 71.43 | 69.38 |
| TraesCS1B01G314000.1 | Wheat | extracellular, plasma membrane | 67.49 | 65.87 |
| HORVU3Hr1G080440.1 | Barley | plastid | 92.61 | 65.73 |
| Zm00001d043087_P001 | Maize | cytosol, extracellular, plastid | 67.98 | 65.09 |
| Zm00001d012520_P001 | Maize | cytosol | 64.04 | 63.11 |
| GSMUA_Achr11P... | Banana | cytosol | 50.74 | 52.02 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 51.23 | 51.49 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 52.71 | 51.44 |
| GSMUA_Achr10P... | Banana | plastid | 50.74 | 49.28 |
| TraesCS5B01G144000.1 | Wheat | cytosol | 53.2 | 47.37 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 45.81 | 46.5 |
| GSMUA_Achr11P... | Banana | cytosol | 50.74 | 43.83 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 46.31 | 43.52 |
| TraesCS4B01G123400.1 | Wheat | cytosol | 51.72 | 43.03 |
| KRH09578 | Soybean | cytosol | 42.86 | 41.83 |
| CDY62436 | Canola | cytosol | 38.92 | 40.31 |
| AT2G38640.1 | Thale cress | cytosol | 38.92 | 40.31 |
| TraesCS4B01G396800.1 | Wheat | plastid | 41.87 | 40.09 |
| CDY07715 | Canola | cytosol | 38.42 | 39.8 |
| CDY62435 | Canola | cytosol | 37.93 | 39.49 |
| CDY07714 | Canola | cytosol | 37.93 | 39.49 |
| Bra000079.1-P | Field mustard | cytosol | 37.44 | 38.78 |
| CDX93313 | Canola | cytosol | 37.44 | 38.78 |
| Bra000080.1-P | Field mustard | cytosol | 36.95 | 38.46 |
| CDX91482 | Canola | cytosol | 36.95 | 38.46 |
| Bra017111.1-P | Field mustard | cytosol | 36.95 | 38.27 |
| CDY18377 | Canola | cytosol | 36.95 | 38.27 |
| Bra005092.1-P | Field mustard | cytosol | 36.45 | 37.95 |
| CDY60759 | Canola | cytosol | 35.96 | 37.44 |
| TraesCS3B01G486300.1 | Wheat | plastid | 31.03 | 32.14 |
| TraesCS3B01G486200.1 | Wheat | plastid | 29.56 | 30.15 |
| TraesCS3B01G487200.1 | Wheat | cytosol | 28.57 | 29.59 |
| TraesCS3B01G486900.1 | Wheat | cytosol, plastid | 27.59 | 28.57 |
| TraesCS3B01G487000.1 | Wheat | plastid | 27.09 | 28.06 |
| TraesCS2B01G132800.1 | Wheat | plastid | 29.06 | 27.57 |
| TraesCS3B01G340800.1 | Wheat | cytosol | 29.56 | 27.27 |
| TraesCS3B01G486600.1 | Wheat | cytosol | 26.11 | 26.9 |
| TraesCS5B01G143600.1 | Wheat | mitochondrion | 31.53 | 25.81 |
| TraesCS3B01G486800.1 | Wheat | plastid | 28.57 | 25.66 |
| TraesCS5B01G143700.1 | Wheat | plastid | 31.53 | 24.24 |
| TraesCS1B01G341900.1 | Wheat | cytosol | 26.6 | 22.98 |
| TraesCS3B01G487100.1 | Wheat | plastid | 23.65 | 22.97 |
| TraesCS4B01G155500.1 | Wheat | cytosol, mitochondrion | 27.59 | 22.4 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G372300.1 | EnsemblPlantsGene:TraesCS3B01G372300 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF21 | PFAM:PF04525 | SUPFAM:SSF54518 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:584984555..584985166
Molecular Weight (calculated)
22032.5 Da
IEP (calculated)
9.212
GRAVY (calculated)
-0.057
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVHPNMVP APGAVGDVPC APASSAVEGP TTLTVWRKSL LFDCKGFTVF DAKGNLAYRV DSYASETGDE VVLMDAAGRP SFTVRRKRFS LQGEQWLVFA
101: GEETRRPVYA VRRSGRGKTM AHVTACAGAG PSYEVEGSYA RRSCVVYDGE RRAVVEIRPK EVVGTDVFRL AVQPGVDVSL AMAVVVALEQ MFARPSLLRS
201: WST
101: GEETRRPVYA VRRSGRGKTM AHVTACAGAG PSYEVEGSYA RRSCVVYDGE RRAVVEIRPK EVVGTDVFRL AVQPGVDVSL AMAVVVALEQ MFARPSLLRS
201: WST
001: MFPFLKQRSR SVHGEDAPSS TESTVSVAAA DIGGACTTLT VWRKSLLVSC EGFTVIDSNG DLIYRVDNYA RTRPEELILM DKDGNSLLLM HRTKKITLVD
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S
Arabidopsis Description
Protein LURP-one-related 17 [Source:UniProtKB/Swiss-Prot;Acc:A0MFL4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.