Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G121500.1 | Wheat | cytosol | 98.36 | 98.36 |
| TraesCS4A01G192000.1 | Wheat | cytosol | 97.13 | 97.13 |
| HORVU4Hr1G024080.1 | Barley | cytosol | 92.62 | 92.62 |
| TraesCS5B01G144000.1 | Wheat | cytosol | 63.52 | 67.98 |
| Os11t0120300-01 | Rice | cytosol | 58.2 | 64.25 |
| Os12t0120100-01 | Rice | cytosol | 57.79 | 63.51 |
| EES16590 | Sorghum | cytosol | 57.38 | 62.22 |
| EES15617 | Sorghum | cytosol | 58.2 | 61.74 |
| Zm00001d052371_P001 | Maize | cytosol | 54.51 | 60.45 |
| Zm00001d044671_P001 | Maize | cytosol | 53.69 | 60.09 |
| EES09153 | Sorghum | cytosol | 57.38 | 60.09 |
| EES16588 | Sorghum | cytosol, nucleus, plastid | 55.74 | 56.67 |
| Zm00001d044474_P001 | Maize | cytosol | 54.92 | 55.83 |
| GSMUA_Achr11P... | Banana | cytosol | 43.03 | 53.03 |
| EES09152 | Sorghum | plastid | 53.69 | 52.4 |
| TraesCS3B01G372300.1 | Wheat | cytosol, peroxisome, plastid | 43.03 | 51.72 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 43.44 | 50.96 |
| TraesCS3B01G372600.1 | Wheat | cytosol, extracellular, peroxisome | 42.62 | 50.73 |
| TraesCS3B01G372400.1 | Wheat | plastid | 42.21 | 50.0 |
| TraesCS1B01G314000.1 | Wheat | extracellular, plasma membrane | 42.62 | 50.0 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 40.98 | 49.51 |
| GSMUA_Achr10P... | Banana | plastid | 41.39 | 48.33 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 38.11 | 46.5 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 40.98 | 46.3 |
| TraesCS4B01G396800.1 | Wheat | plastid | 38.93 | 44.81 |
| GSMUA_Achr11P... | Banana | cytosol | 43.03 | 44.68 |
| KRH09578 | Soybean | cytosol | 34.84 | 40.87 |
| Zm00001d052372_P002 | Maize | plastid | 52.05 | 40.32 |
| AT2G38640.1 | Thale cress | cytosol | 31.97 | 39.8 |
| CDY07714 | Canola | cytosol | 30.74 | 38.46 |
| CDY62435 | Canola | cytosol | 30.74 | 38.46 |
| CDY62436 | Canola | cytosol | 30.74 | 38.27 |
| CDY07715 | Canola | cytosol | 30.74 | 38.27 |
| Bra000079.1-P | Field mustard | cytosol | 30.74 | 38.27 |
| Bra000080.1-P | Field mustard | cytosol | 30.33 | 37.95 |
| Bra017111.1-P | Field mustard | cytosol | 30.33 | 37.76 |
| CDY18377 | Canola | cytosol | 30.33 | 37.76 |
| CDX93313 | Canola | cytosol | 30.33 | 37.76 |
| CDX91482 | Canola | cytosol | 29.92 | 37.44 |
| Bra005092.1-P | Field mustard | cytosol | 29.51 | 36.92 |
| CDY60759 | Canola | cytosol | 28.28 | 35.38 |
| TraesCS3B01G340800.1 | Wheat | cytosol | 29.1 | 32.27 |
| TraesCS1B01G341900.1 | Wheat | cytosol | 29.51 | 30.64 |
| TraesCS3B01G486300.1 | Wheat | plastid | 24.59 | 30.61 |
| TraesCS3B01G487000.1 | Wheat | plastid | 24.18 | 30.1 |
| TraesCS3B01G486200.1 | Wheat | plastid | 24.18 | 29.65 |
| TraesCS3B01G487200.1 | Wheat | cytosol | 23.77 | 29.59 |
| TraesCS3B01G486900.1 | Wheat | cytosol, plastid | 23.36 | 29.08 |
| TraesCS3B01G486600.1 | Wheat | cytosol | 22.54 | 27.92 |
| TraesCS5B01G143600.1 | Wheat | mitochondrion | 27.05 | 26.61 |
| TraesCS3B01G486800.1 | Wheat | plastid | 23.77 | 25.66 |
| TraesCS2B01G132800.1 | Wheat | plastid | 21.72 | 24.77 |
| TraesCS5B01G143700.1 | Wheat | plastid | 26.23 | 24.24 |
| TraesCS3B01G487100.1 | Wheat | plastid | 20.49 | 23.92 |
| TraesCS4B01G155500.1 | Wheat | cytosol, mitochondrion | 21.72 | 21.2 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G123400.1 | EnsemblPlantsGene:TraesCS4B01G123400 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF5 | PFAM:PF04525 | SEG:seg |
| SUPFAM:SSF54518 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:147066156..147066890
Molecular Weight (calculated)
26332.7 Da
IEP (calculated)
8.502
GRAVY (calculated)
-0.120
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVHPDAVV ALPEAPAAGH SRPVGAGAEE EEPPPEAMAL TVWRKSLLFN CDGFTVFDAT GGLAFRVDCY GTSGRRRRHA EDVVLMDAAG FPLLTVRRRR
101: LSLAEHWVIY DGDGGEVDAP KPLLSVRRCH AGLLRHAHAS SSSKQKALAH VTPLTPALRE SYVVEGSYAR RCVAVRDARG EAVVEVRRKE SPVGDEVFRL
201: VVPDPRRLGT PLAMGIVMAL DEMFGSSGAG CSAARSLLPR SWSM
101: LSLAEHWVIY DGDGGEVDAP KPLLSVRRCH AGLLRHAHAS SSSKQKALAH VTPLTPALRE SYVVEGSYAR RCVAVRDARG EAVVEVRRKE SPVGDEVFRL
201: VVPDPRRLGT PLAMGIVMAL DEMFGSSGAG CSAARSLLPR SWSM
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.