CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052371_P001	Maize	cytosol	74.25	78.64
Os11t0120300-01	Rice	cytosol	58.8	61.99
EES15617	Sorghum	cytosol	60.94	61.74
Os12t0120100-01	Rice	cytosol	58.8	61.71
TraesCS5D01G147200.1	Wheat	cytosol	60.09	61.4
EES16590	Sorghum	cytosol	59.23	61.33
TraesCS5A01G145200.1	Wheat	cytosol	60.52	61.3
TraesCS5B01G144000.1	Wheat	cytosol	59.66	60.96
HORVU5Hr1G046200.1	Barley	cytosol	59.23	59.23
EES16588	Sorghum	cytosol, nucleus, plastid	60.52	58.75
TraesCS4B01G123400.1	Wheat	cytosol	60.09	57.38
TraesCS4D01G121500.1	Wheat	cytosol	59.66	56.97
TraesCS4A01G192000.1	Wheat	cytosol	59.23	56.56
HORVU4Hr1G024080.1	Barley	cytosol	59.23	56.56
EES09152	Sorghum	plastid	59.66	55.6
EES01655	Sorghum	cytosol	47.64	53.11
GSMUA_Achr11P...	Banana	cytosol	43.35	51.01
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	45.06	50.48
Zm00001d052372_P002	Maize	plastid	68.24	50.48
GSMUA_Achr7P21880_001	Banana	cytosol	43.35	50.0
VIT_08s0032g00760.t01	Wine grape	cytosol	41.63	48.5
GSMUA_Achr10P...	Banana	plastid	43.35	48.33
EES19708	Sorghum	plastid	46.35	48.21
VIT_08s0056g00180.t01	Wine grape	cytosol	42.92	46.3
AT2G38640.1	Thale cress	cytosol	37.77	44.9
Bra000079.1-P	Field mustard	cytosol	37.34	44.39
CDY07715	Canola	cytosol	37.34	44.39
CDY62436	Canola	cytosol	37.34	44.39
CDY62435	Canola	cytosol	36.91	44.1
CDX91482	Canola	cytosol	36.91	44.1
CDY07714	Canola	cytosol	36.91	44.1
CDY18377	Canola	cytosol	36.91	43.88
Bra017111.1-P	Field mustard	cytosol	36.91	43.88
CDX93313	Canola	cytosol	36.91	43.88
Bra000080.1-P	Field mustard	cytosol	36.48	43.59
Bra005092.1-P	Field mustard	cytosol	36.48	43.59
GSMUA_Achr11P...	Banana	cytosol	43.35	42.98
CDY60759	Canola	cytosol	35.19	42.05
KRH09578	Soybean	cytosol	36.91	41.35
EES04157	Sorghum	plastid	26.18	30.35
EES03690	Sorghum	cytosol	28.33	29.6
EER99890	Sorghum	plastid	25.32	29.06
EES04156	Sorghum	plastid	26.61	28.84
EES18481	Sorghum	cytosol	29.18	28.22
EES09156	Sorghum	plastid	28.33	25.98
EES04155	Sorghum	cytosol	23.61	25.23
EES09154	Sorghum	plastid	30.9	25.17
KXG39402	Sorghum	mitochondrion	27.04	24.42
EES02017	Sorghum	cytosol, mitochondrion, plastid	21.89	23.18
EES15616	Sorghum	plastid	29.61	22.12

Protein Annotations

Gene3D:3.20.90.20	MapMan:35.1	EntrezGene:8083022	UniProt:C5Y3K0	EnsemblPlants:EES09153	ProteinID:EES09153
ProteinID:EES09153.1	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf	PFAM:PF04525
PANTHER:PTHR31087	PANTHER:PTHR31087:SF5	EnsemblPlantsGene:SORBI_3005G016500	SUPFAM:SSF54518	InterPro:Tubby-like_C	UniParc:UPI0001A8667D
RefSeq:XP_002450165.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:1462815..1464375

Molecular Weight (calculated)

24562.6 Da

IEP (calculated)

9.989

GRAVY (calculated)

-0.021

Length

233 amino acids

Sequence
(BLAST)

001: MAKVHPNAVA PPPPEPRAAA EQEPPTVLTV WRKSLLFNCD GFTVYDARGD LAFRVDCYAS RSRTRRDVVL MDAGGKPLLT VRRKTRLAGL ADRCWVIYDG
101: DADADKSAAA TPTPLLSVRR HATSGGCKTL ARVDAARLAL PLPAAAAPSY VVEGSYGQRA CAVRDAARGG AVVAEVQRKE AVGDDVFRLV VPGPRLAAPL
201: AMALVIALDD MFRGGSGAGG WSARSLLGRT LSA

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.