CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
plasma membrane 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04157	Sorghum	plastid	65.12	69.65
TraesCS3A01G449900.1	Wheat	plastid	60.93	66.84
TraesCS3A01G450000.1	Wheat	cytosol	60.93	66.84
TraesCS3D01G442300.1	Wheat	plastid	59.07	66.15
TraesCS3B01G486300.1	Wheat	plastid	60.0	65.82
TraesCS3B01G486900.1	Wheat	cytosol, plastid	59.07	64.8
TraesCS3B01G486600.1	Wheat	cytosol	59.07	64.47
HORVU3Hr1G097260.1	Barley	cytosol	57.67	64.25
TraesCS3A01G449800.1	Wheat	cytosol	58.14	63.45
TraesCS3A01G449700.1	Wheat	plastid	56.74	63.21
TraesCS3D01G442800.1	Wheat	cytosol, plastid	58.6	62.69
TraesCS3D01G442600.1	Wheat	cytosol	58.14	62.5
TraesCS3D01G442200.1	Wheat	cytosol, plastid	56.74	62.24
HORVU3Hr1G097270.1	Barley	plastid	55.81	62.18
HORVU3Hr1G097510.1	Barley	plastid	33.95	61.86
TraesCS3B01G486200.1	Wheat	plastid	56.28	60.8
TraesCS3D01G443000.1	Wheat	plastid	55.35	60.41
TraesCS3A01G449500.1	Wheat	cytosol	47.44	60.35
EES04155	Sorghum	cytosol	60.93	60.09
HORVU3Hr1G097400.6	Barley	cytosol, mitochondrion, plastid	60.0	59.72
TraesCS3D01G443100.1	Wheat	cytosol, plastid	54.88	59.6
HORVU3Hr1G097390.1	Barley	plastid	55.81	59.41
TraesCS3A01G450100.1	Wheat	cytosol	53.95	59.18
HORVU3Hr1G097460.1	Barley	mitochondrion, plastid	58.14	58.96
TraesCS3B01G487200.1	Wheat	cytosol	53.02	58.16
TraesCS3B01G487000.1	Wheat	plastid	52.56	57.65
TraesCS3A01G450200.1	Wheat	plastid	53.02	57.58
Os01t0931600-00	Rice	cytosol	56.74	56.48
TraesCS3D01G442400.1	Wheat	cytosol	57.21	56.16
TraesCS3A01G449600.1	Wheat	mitochondrion	32.09	54.33
HORVU3Hr1G097470.1	Barley	plastid	53.49	52.75
TraesCS3B01G486800.1	Wheat	plastid	55.35	52.65
TraesCS3D01G442500.1	Wheat	cytosol	53.49	51.34
TraesCS3B01G487100.1	Wheat	plastid	47.91	49.28
EES02017	Sorghum	cytosol, mitochondrion, plastid	45.12	44.09
EER99890	Sorghum	plastid	35.81	37.93
EES01655	Sorghum	cytosol	28.84	29.67
EES15617	Sorghum	cytosol	31.16	29.13
EES16590	Sorghum	cytosol	28.84	27.56
KXG39402	Sorghum	mitochondrion	33.02	27.52
EES09153	Sorghum	cytosol	28.84	26.61
EES16588	Sorghum	cytosol, nucleus, plastid	27.91	25.0
EES19708	Sorghum	plastid	25.12	24.11
EES09152	Sorghum	plastid	25.12	21.6
EES09156	Sorghum	plastid	24.65	20.87
EES03690	Sorghum	cytosol	20.47	19.73
EES09154	Sorghum	plastid	24.65	18.53
EES18481	Sorghum	cytosol	20.47	18.26
EES15616	Sorghum	plastid	26.05	17.95

Protein Annotations

EnsemblPlants:EES04156	EnsemblPlantsGene:SORBI_3003G414800	EntrezGene:8059407	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525
ProteinID:EES04156	ProteinID:EES04156.1	RefSeq:XP_002459036.1	SEG:seg	SUPFAM:SSF54518	UniParc:UPI0001A85635
UniProt:C5XH25	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:72139601..72141425

Molecular Weight (calculated)

22657.3 Da

IEP (calculated)

9.076

GRAVY (calculated)

-0.126

Length

215 amino acids

Sequence
(BLAST)

001: MAKIQPLPLP AAAAASPPSC SPSGDGQSLQ KQAEYTVWMK SLVFNGNGCT VYGADGGVAF RVDNYGCRGG REVFLMDRAG KTLIRIQRKG RLGLFRRWEA
101: CRYSESDDGE ETTTPWFRVQ KQKADDGKNG AAVTMMHHGR GGSAAAYTIG WCAAGKLGYE VTGAGGAVAA AVERKRTPSG VVLGDDVLTL TVGAGTDHLL
201: ALGLVVVCGL MKRCL

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.