Factsheet for TraesCS3D01G442800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G486900.1	Wheat	cytosol, plastid	89.05	91.33
TraesCS3D01G442600.1	Wheat	cytosol	90.55	91.0
TraesCS3A01G449900.1	Wheat	plastid	88.06	90.31
TraesCS3B01G486600.1	Wheat	cytosol	86.07	87.82
TraesCS3A01G449800.1	Wheat	cytosol	84.58	86.29
TraesCS3D01G442300.1	Wheat	plastid	81.59	85.42
TraesCS3D01G443000.1	Wheat	plastid	80.6	82.23
HORVU3Hr1G097460.1	Barley	mitochondrion, plastid	85.57	81.13
TraesCS3D01G443100.1	Wheat	cytosol, plastid	79.6	80.81
HORVU3Hr1G097400.6	Barley	cytosol, mitochondrion, plastid	86.57	80.56
TraesCS3D01G442200.1	Wheat	cytosol, plastid	78.11	80.1
TraesCS3D01G442400.1	Wheat	cytosol	83.58	76.71
TraesCS3D01G442500.1	Wheat	cytosol	82.59	74.11
EES04157	Sorghum	plastid	64.18	64.18
Zm00001d011926_P001	Maize	cytosol	59.7	59.41
EES04156	Sorghum	plastid	62.69	58.6
Zm00001d042239_P001	Maize	plastid	63.68	58.45
Zm00001d011925_P001	Maize	cytosol	59.2	58.33
EES04155	Sorghum	cytosol	61.69	56.88
Os01t0931600-00	Rice	cytosol	60.2	56.02
TraesCS3D01G442700.1	Wheat	cytosol	48.76	40.5
TraesCS2D01G114400.1	Wheat	plastid	38.31	35.65
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	30.35	29.61
TraesCS3D01G334200.1	Wheat	cytosol	29.85	29.56
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	29.85	28.85
TraesCS4D01G168500.1	Wheat	mitochondrion	36.32	28.29
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	28.36	27.27
TraesCS5D01G147200.1	Wheat	cytosol	30.85	27.19
TraesCS3D01G306600.1	Wheat	cytosol	25.87	23.74
TraesCS5D01G147500.1	Wheat	nucleus	29.35	23.6
TraesCS4D01G121500.1	Wheat	cytosol	27.86	22.95
TraesCS5D01G147400.1	Wheat	plastid	28.86	22.05
TraesCS1D01G330600.1	Wheat	cytosol	25.37	21.61

Protein Annotations

EnsemblPlants:TraesCS3D01G442800.1	EnsemblPlantsGene:TraesCS3D01G442800	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:552626816..552627421

Molecular Weight (calculated)

21470.7 Da

IEP (calculated)

8.488

GRAVY (calculated)

-0.141

Length

201 amino acids

Sequence
(BLAST)

001: MAKIQPLTAA ASPSSSDDHP SQQAYTVWMK SLVFNGNGCT VYGPDGAVAF RVDNYGCRGG REVFFMDRQG NALIRIRRKG FGMVRRWEVC RCAHNGGQEE
101: EATPWFSVRR AEKGGAAVAM HGGAGTCYTI DGCSARKSEY RVRGVDGAVV AEVARKQTAA GVVLGEDVLT LKVAPEADHL LFLGLVVVRG LMPSSTAPCD
201: G

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.