CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011925_P001	Maize	cytosol	86.07	84.8
Zm00001d042239_P001	Maize	plastid	87.56	80.37
TraesCS3A01G449900.1	Wheat	plastid	67.16	68.88
TraesCS3A01G450000.1	Wheat	cytosol	66.17	67.86
TraesCS3D01G442300.1	Wheat	plastid	64.68	67.71
TraesCS3B01G486300.1	Wheat	plastid	65.67	67.35
HORVU3Hr1G097260.1	Barley	cytosol	64.18	66.84
TraesCS3A01G449500.1	Wheat	cytosol	55.72	66.27
TraesCS3A01G449800.1	Wheat	cytosol	64.68	65.99
TraesCS3B01G486900.1	Wheat	cytosol, plastid	64.18	65.82
HORVU3Hr1G097270.1	Barley	plastid	63.18	65.8
EES04156	Sorghum	plastid	69.65	65.12
TraesCS3D01G442600.1	Wheat	cytosol	64.68	65.0
TraesCS3B01G486200.1	Wheat	plastid	64.18	64.82
TraesCS3D01G442200.1	Wheat	cytosol, plastid	62.69	64.29
TraesCS3A01G449700.1	Wheat	plastid	61.69	64.25
TraesCS3D01G442800.1	Wheat	cytosol, plastid	64.18	64.18
TraesCS3B01G486600.1	Wheat	cytosol	62.69	63.96
TraesCS3A01G450200.1	Wheat	plastid	62.19	63.13
TraesCS3D01G443000.1	Wheat	plastid	61.69	62.94
TraesCS3A01G450100.1	Wheat	cytosol	60.7	62.24
TraesCS3B01G487200.1	Wheat	cytosol	60.2	61.73
HORVU3Hr1G097400.6	Barley	cytosol, mitochondrion, plastid	66.17	61.57
TraesCS3A01G449600.1	Wheat	mitochondrion	38.81	61.42
TraesCS3B01G487000.1	Wheat	plastid	59.7	61.22
TraesCS3D01G443100.1	Wheat	cytosol, plastid	60.2	61.11
TraesCS3D01G442400.1	Wheat	cytosol	66.17	60.73
HORVU3Hr1G097460.1	Barley	mitochondrion, plastid	63.68	60.38
HORVU3Hr1G097510.1	Barley	plastid	35.32	60.17
HORVU3Hr1G097390.1	Barley	plastid	59.2	58.91
EES04155	Sorghum	cytosol	62.69	57.8
Os01t0931600-00	Rice	cytosol	60.2	56.02
HORVU3Hr1G097470.1	Barley	plastid	60.2	55.5
TraesCS3B01G486800.1	Wheat	plastid	62.19	55.31
TraesCS3B01G487100.1	Wheat	plastid	55.72	53.59
TraesCS3D01G442500.1	Wheat	cytosol	56.22	50.45
EES02017	Sorghum	cytosol, mitochondrion, plastid	49.25	45.0
EER99890	Sorghum	plastid	40.3	39.9
EES01655	Sorghum	cytosol	30.35	29.19
KXG39402	Sorghum	mitochondrion	36.32	28.29
EES15617	Sorghum	cytosol	32.34	28.26
EES16590	Sorghum	cytosol	31.34	28.0
EES09153	Sorghum	cytosol	30.35	26.18
EES19708	Sorghum	plastid	28.86	25.89
EES16588	Sorghum	cytosol, nucleus, plastid	29.85	25.0
EES09156	Sorghum	plastid	29.85	23.62
EES09152	Sorghum	plastid	28.86	23.2
EES03690	Sorghum	cytosol	24.88	22.42
EES09154	Sorghum	plastid	30.85	21.68
EES18481	Sorghum	cytosol	23.88	19.92
EES15616	Sorghum	plastid	28.36	18.27

Protein Annotations

Gene3D:3.20.90.20	MapMan:35.1	EntrezGene:8059408	UniProt:C5XH26	EnsemblPlants:EES04157	ProteinID:EES04157
ProteinID:EES04157.1	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf	PFAM:PF04525
PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	EnsemblPlantsGene:SORBI_3003G414900	SUPFAM:SSF54518	InterPro:Tubby-like_C	UniParc:UPI0001A85636
RefSeq:XP_002459037.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:72143248..72144490

Molecular Weight (calculated)

21104.5 Da

IEP (calculated)

9.334

GRAVY (calculated)

-0.012

Length

201 amino acids

Sequence
(BLAST)

001: MAKIQPLPAA SSPAPPSSTV EGQQVYTVWM KSLVFNGNGC TVYGADGGVA FRVDNYGCRG GREAFLMDRA GRTLVGIRRR SCFGMLRRWE ACRYSESGSD
101: GGEETRTPWF AVRKAPGGGA SVTMHGSGRT TYAIVGGCSR KPDYRIIGGT DGAAVAAVAR KQTPAGVVLG DDVLTLTVAP GTDHLLVLGL VVVCGLMNRC
201: L

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.