Factsheet for TraesCS3D01G442200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G486300.1	Wheat	plastid	88.27	88.27
HORVU3Hr1G097260.1	Barley	cytosol	85.2	86.53
TraesCS3A01G449700.1	Wheat	plastid	85.2	86.53
TraesCS3D01G442300.1	Wheat	plastid	84.18	85.94
TraesCS3A01G449600.1	Wheat	mitochondrion	55.61	85.83
HORVU3Hr1G097270.1	Barley	plastid	83.16	84.46
TraesCS3D01G443100.1	Wheat	cytosol, plastid	81.63	80.81
TraesCS3B01G487200.1	Wheat	cytosol	80.1	80.1
TraesCS3D01G442600.1	Wheat	cytosol	80.1	78.5
TraesCS3D01G443000.1	Wheat	plastid	78.57	78.17
TraesCS3D01G442800.1	Wheat	cytosol, plastid	80.1	78.11
TraesCS3D01G442400.1	Wheat	cytosol	79.08	70.78
EES04157	Sorghum	plastid	64.29	62.69
TraesCS3D01G442500.1	Wheat	cytosol	69.9	61.16
Zm00001d011926_P001	Maize	cytosol	60.71	58.91
Zm00001d011925_P001	Maize	cytosol	60.71	58.33
Zm00001d042239_P001	Maize	plastid	63.78	57.08
EES04156	Sorghum	plastid	62.24	56.74
EES04155	Sorghum	cytosol	62.76	56.42
Os01t0931600-00	Rice	cytosol	60.71	55.09
TraesCS3D01G442700.1	Wheat	cytosol	48.98	39.67
TraesCS2D01G114400.1	Wheat	plastid	40.31	36.57
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	32.14	30.58
TraesCS3D01G334200.1	Wheat	cytosol	31.63	30.54
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	31.63	29.81
TraesCS4D01G168500.1	Wheat	mitochondrion	37.24	28.29
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	29.59	27.75
TraesCS5D01G147200.1	Wheat	cytosol	32.14	27.63
TraesCS3D01G306600.1	Wheat	cytosol	29.08	26.03
TraesCS4D01G121500.1	Wheat	cytosol	29.59	23.77
TraesCS5D01G147500.1	Wheat	nucleus	29.59	23.2
TraesCS5D01G147400.1	Wheat	plastid	31.12	23.19
TraesCS1D01G330600.1	Wheat	cytosol	27.55	22.88

Protein Annotations

EnsemblPlants:TraesCS3D01G442200.1	EnsemblPlantsGene:TraesCS3D01G442200	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:552416310..552416900

Molecular Weight (calculated)

21194.6 Da

IEP (calculated)

9.724

GRAVY (calculated)

-0.145

Length

196 amino acids

Sequence
(BLAST)

001: MAKIQPLPAP PSPSSSDDHL QGQRARQAYT VWMKSLVFNG NGCAVYGPDG SVAFRVDNYG CRGGREVLLM DRAGNALIRF RRKGFGMFRR WEVCRYEEGE
101: EATAWFSVRR AKKGGAAVAM HGGAATCYRI DGGCARKPEY RVSGVDGSVV AEVARKQTAA GVVLGEDVLT LTVAPEMDQL LALGLVVVRG LINRSL

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.