Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G144000.1 | Wheat | cytosol | 95.61 | 95.61 |
| TraesCS5A01G145200.1 | Wheat | cytosol | 96.05 | 95.22 |
| HORVU5Hr1G046200.1 | Barley | cytosol | 93.86 | 91.85 |
| TraesCS4D01G121500.1 | Wheat | cytosol | 70.61 | 65.98 |
| EES16590 | Sorghum | cytosol | 62.72 | 63.56 |
| Os11t0120300-01 | Rice | cytosol | 61.4 | 63.35 |
| Zm00001d052371_P001 | Maize | cytosol | 60.96 | 63.18 |
| EES15617 | Sorghum | cytosol | 63.6 | 63.04 |
| Os12t0120100-01 | Rice | cytosol | 60.96 | 62.61 |
| EES09153 | Sorghum | cytosol | 61.4 | 60.09 |
| Zm00001d044671_P001 | Maize | cytosol | 56.58 | 59.17 |
| EES16588 | Sorghum | cytosol, nucleus, plastid | 60.96 | 57.92 |
| Zm00001d044474_P001 | Maize | cytosol | 60.09 | 57.08 |
| TraesCS3D01G334400.1 | Wheat | cytosol, extracellular, peroxisome | 51.32 | 56.8 |
| TraesCS3D01G334300.1 | Wheat | cytosol, extracellular, peroxisome | 51.32 | 56.25 |
| GSMUA_Achr11P... | Banana | cytosol | 48.68 | 56.06 |
| TraesCS3D01G334200.1 | Wheat | cytosol | 48.68 | 54.68 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 48.25 | 54.46 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 49.56 | 54.33 |
| TraesCS1D01G303100.1 | Wheat | extracellular, plasma membrane | 47.81 | 52.15 |
| GSMUA_Achr10P... | Banana | plastid | 47.37 | 51.67 |
| EES09152 | Sorghum | plastid | 56.58 | 51.6 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 42.98 | 49.0 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 45.61 | 48.15 |
| GSMUA_Achr11P... | Banana | cytosol | 48.68 | 47.23 |
| AT2G38640.1 | Thale cress | cytosol | 38.16 | 44.39 |
| CDY18377 | Canola | cytosol | 36.4 | 42.35 |
| CDX93313 | Canola | cytosol | 36.4 | 42.35 |
| Bra017111.1-P | Field mustard | cytosol | 36.4 | 42.35 |
| CDY62435 | Canola | cytosol | 35.96 | 42.05 |
| CDY07714 | Canola | cytosol | 35.96 | 42.05 |
| Zm00001d052372_P002 | Maize | plastid | 57.89 | 41.9 |
| CDY07715 | Canola | cytosol | 35.96 | 41.84 |
| CDY62436 | Canola | cytosol | 35.96 | 41.84 |
| KRH09578 | Soybean | cytosol | 38.16 | 41.83 |
| Bra000080.1-P | Field mustard | cytosol | 35.53 | 41.54 |
| Bra000079.1-P | Field mustard | cytosol | 35.53 | 41.33 |
| CDX91482 | Canola | cytosol | 35.09 | 41.03 |
| Bra005092.1-P | Field mustard | cytosol | 34.65 | 40.51 |
| CDY60759 | Canola | cytosol | 33.33 | 38.97 |
| TraesCS3D01G442300.1 | Wheat | plastid | 27.19 | 32.29 |
| TraesCS3D01G442200.1 | Wheat | cytosol, plastid | 27.63 | 32.14 |
| TraesCS3D01G306600.1 | Wheat | cytosol | 30.26 | 31.51 |
| TraesCS3D01G442600.1 | Wheat | cytosol | 27.63 | 31.5 |
| TraesCS3D01G443000.1 | Wheat | plastid | 27.19 | 31.47 |
| TraesCS3D01G442800.1 | Wheat | cytosol, plastid | 27.19 | 30.85 |
| TraesCS3D01G443100.1 | Wheat | cytosol, plastid | 25.0 | 28.79 |
| TraesCS3D01G442400.1 | Wheat | cytosol | 27.63 | 28.77 |
| TraesCS1D01G330600.1 | Wheat | cytosol | 28.95 | 27.97 |
| TraesCS2D01G114400.1 | Wheat | plastid | 26.32 | 27.78 |
| TraesCS5D01G147400.1 | Wheat | plastid | 31.58 | 27.38 |
| TraesCS3D01G442500.1 | Wheat | cytosol | 26.75 | 27.23 |
| TraesCS5D01G147500.1 | Wheat | nucleus | 28.51 | 26.0 |
| TraesCS3D01G442700.1 | Wheat | cytosol | 25.88 | 24.38 |
| TraesCS4D01G168500.1 | Wheat | mitochondrion | 26.32 | 23.26 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G147200.1 | EnsemblPlantsGene:TraesCS5D01G147200 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF5 | PFAM:PF04525 | SUPFAM:SSF54518 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:233688543..233689229
Molecular Weight (calculated)
24383.3 Da
IEP (calculated)
10.684
GRAVY (calculated)
-0.098
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVHPNVAA PELPAGGRAV VEEEQPTVLT VWRKSLLFNC DGFTVFDAAG GLAFRVDRYG SSSRIRRRAE DVVLMDAAGK PLLTVRRKIK LSLGLGEHWV
101: VYDGEASAST AKPLLSVRRH HAGLRRRASD KTLAHVTPLG PSSAGADAAA YVVEGSYGRR SCAVRDARGG APVAEVRRKE SVGDDVFRLV VPDHRLGTAL
201: SMGVVVALDQ MFGAASSRTS LLPRSWSA
101: VYDGEASAST AKPLLSVRRH HAGLRRRASD KTLAHVTPLG PSSAGADAAA YVVEGSYGRR SCAVRDARGG APVAEVRRKE SVGDDVFRLV VPDHRLGTAL
201: SMGVVVALDQ MFGAASSRTS LLPRSWSA
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.