Factsheet for TraesCS3D01G442700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02017	Sorghum	cytosol, mitochondrion, plastid	50.0	55.0
Zm00001d042237_P001	Maize	mitochondrion	50.83	54.91
Zm00001d011924_P001	Maize	plastid	50.41	51.48
TraesCS3D01G442300.1	Wheat	plastid	39.67	50.0
TraesCS3D01G442600.1	Wheat	cytosol	40.5	49.0
TraesCS3D01G443100.1	Wheat	cytosol, plastid	40.08	48.99
TraesCS3D01G442200.1	Wheat	cytosol, plastid	39.67	48.98
TraesCS3D01G442800.1	Wheat	cytosol, plastid	40.5	48.76
TraesCS3D01G443000.1	Wheat	plastid	38.43	47.21
TraesCS3D01G442400.1	Wheat	cytosol	41.74	46.12
Os01t0931700-00	Rice	plastid	29.34	43.29
TraesCS3D01G442500.1	Wheat	cytosol	34.71	37.5
TraesCS2D01G114400.1	Wheat	plastid	31.41	35.19
TraesCS3D01G334200.1	Wheat	cytosol	21.9	26.11
TraesCS5D01G147200.1	Wheat	cytosol	24.38	25.88
TraesCS4D01G168500.1	Wheat	mitochondrion	26.45	24.81
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	21.07	24.76
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	20.66	24.04
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	20.25	23.45
TraesCS5D01G147400.1	Wheat	plastid	24.38	22.43
TraesCS5D01G147500.1	Wheat	nucleus	23.14	22.4
TraesCS4D01G121500.1	Wheat	cytosol	22.31	22.13
TraesCS3D01G306600.1	Wheat	cytosol	17.77	19.63
TraesCS1D01G330600.1	Wheat	cytosol	18.59	19.07

Protein Annotations

EnsemblPlants:TraesCS3D01G442700.1	EnsemblPlantsGene:TraesCS3D01G442700	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:552619077..552619929

Molecular Weight (calculated)

26913.0 Da

IEP (calculated)

8.463

GRAVY (calculated)

-0.327

Length

242 amino acids

Sequence
(BLAST)

001: MYETINEKHT VCSAHYLISI SIYTSSSGNM ATARIQPLSA GQQHESAGGD QDQKKMVVYT VWMKSLVFNG HGCTIYGQNG RVAYRVDNYA CTRSREVFVM
101: DTAGKALIKL HLKKNFGFFE TWQGYLCCND DDDDDDTSSF QQEPWFSVRK EHRILNKDGR RHGSRAIVRV AADGKAYTID GASRGSEYYR VSDSDARAVR
201: RKRTASGVAL GEDVLTLMMG PAADRLLVVG LVVVCGLLSR CI

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.