Factsheet for Os01t0931700-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 1
extracellular 3
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G442700.1	Wheat	cytosol	43.29	29.34
EES02017	Sorghum	cytosol, mitochondrion, plastid	39.02	29.09
Zm00001d042237_P001	Maize	mitochondrion	39.63	29.02
Zm00001d011924_P001	Maize	plastid	40.85	28.27
Os01t0931600-00	Rice	cytosol	34.15	25.93
Os07t0672600-00	Rice	plastid	23.78	17.03
Os01t0817650-00	Rice	cytosol, extracellular, plastid	19.51	15.02
Os11t0120300-01	Rice	cytosol	19.51	14.48
Os12t0120100-01	Rice	cytosol	19.51	14.41
Os05t0484800-01	Rice	plastid	20.12	14.1
Os12t0120500-01	Rice	plastid	18.29	13.16
Os11t0121000-00	Rice	plastid	18.29	13.1
Os05t0311500-01	Rice	cytosol	16.46	12.56
Os01t0771000-01	Rice	cytosol	12.2	8.81
Os05t0510100-01	Rice	cytosol	10.98	7.59

Protein Annotations

Gene3D:3.20.90.20	MapMan:35.2	UniProt:A0A0P0VCE9	ProteinID:BAS76046.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR025659
InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf	EnsemblPlantsGene:Os01g0931700	EnsemblPlants:Os01t0931700-00	PFAM:PF04525
PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	SUPFAM:SSF54518	InterPro:Tubby-like_C	UniParc:UPI000393B920	SEG:seg

Description

Tubby, C-terminal domain containing protein. (Os01t0931700-00)

Coordinates

chr1:+:40880104..40881181

Molecular Weight (calculated)

18257.2 Da

IEP (calculated)

10.499

GRAVY (calculated)

-0.247

Length

164 amino acids

Sequence
(BLAST)

001: MAIYIYASNV LIHLSHCKSA NLNLNLINLN SSAIASFRQE MAIAPPRIQP VSAHLHSSAS PKDSDHQEKK QVCYTVWMKS LVFNGRGCTV YGQDGRAAYR
101: VDNYACRRSR EVFVMDSGGK TLLKLLKKCS RHGKATPAAT TIMAMLLQPW KISHGSGCRR STRF

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.