Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0121000-00 | Rice | plastid | 96.05 | 95.63 |
| TraesCS5A01G144800.1 | Wheat | nucleus | 67.11 | 64.02 |
| HORVU5Hr1G046140.1 | Barley | mitochondrion | 67.98 | 63.79 |
| TraesCS5B01G143600.1 | Wheat | mitochondrion | 69.3 | 63.71 |
| TraesCS5D01G147500.1 | Wheat | nucleus | 67.54 | 61.6 |
| EES09156 | Sorghum | plastid | 66.23 | 59.45 |
| Zm00001d005038_P001 | Maize | plastid | 66.23 | 59.22 |
| GSMUA_Achr11P... | Banana | cytosol | 46.05 | 51.22 |
| VIT_08s0056g00130.t01 | Wine grape | cytosol | 51.32 | 49.16 |
| GSMUA_Achr7P21840_001 | Banana | cytosol | 44.3 | 49.03 |
| PGSC0003DMT400030793 | Potato | cytosol | 39.04 | 41.78 |
| GSMUA_Achr4P02400_001 | Banana | cytosol | 40.79 | 38.75 |
| Solyc09g005210.2.1 | Tomato | nucleus | 44.3 | 38.55 |
| Os11t0120300-01 | Rice | cytosol | 27.63 | 28.51 |
| Os12t0120100-01 | Rice | cytosol | 27.63 | 28.38 |
| Os01t0817650-00 | Rice | cytosol, extracellular, plastid | 25.88 | 27.7 |
| Os01t0771000-01 | Rice | cytosol | 27.19 | 27.31 |
| Os05t0484800-01 | Rice | plastid | 26.32 | 25.64 |
| Os05t0311500-01 | Rice | cytosol | 24.12 | 25.58 |
| Os05t0510100-01 | Rice | cytosol | 26.32 | 25.32 |
| Os01t0931600-00 | Rice | cytosol | 22.81 | 24.07 |
| Os07t0672600-00 | Rice | plastid | 23.68 | 23.58 |
| Os01t0931700-00 | Rice | plastid | 13.16 | 18.29 |
Protein Annotations
| EMBL:AK103389 | EnsemblPlants:Os12t0120500-01 | EnsemblPlantsGene:Os12g0120500 | EntrezGene:4351355 | Gene3D:3.20.90.20 | InterPro:IPR025659 |
| InterPro:IPR038595 | InterPro:LOR | InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF26 |
| PFAM:PF04525 | ProteinID:ABA95675.1 | ProteinID:BAF29039.1 | ProteinID:BAT15648.1 | RefSeq:XP_015620367.1 | SEG:seg |
| SUPFAM:SSF54518 | UniParc:UPI0000681B46 | UniProt:Q2QYG5 | MapMan:35.1 | : | : |
Description
Protein of unknown function DUF567 family protein. (Os12t0120500-01)
Coordinates
chr12:-:975104..977096
Molecular Weight (calculated)
25127.0 Da
IEP (calculated)
9.086
GRAVY (calculated)
-0.284
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRIHPSYQR QDAAAAAAST AAPRAAVYTV WKRSSMGFQG TDGFSVYDDA GSLAFRVDNY SRRRKLFSGD LLLMDGHGSP LLALTPQIIS MHDQWNCYRA
101: SEEGQGKRAR SQQLFSMRKC SVMQSSHEAE VHMSGCTHAS SDRTGHVPAF SIEGSFKRRS CKIRNSGGEE VARITRKKAG AASLSLTLAE DVFSLEVQPN
201: VDCAMIMAFV IVLDRICWKP YTPMICSS
101: SEEGQGKRAR SQQLFSMRKC SVMQSSHEAE VHMSGCTHAS SDRTGHVPAF SIEGSFKRRS CKIRNSGGEE VARITRKKAG AASLSLTLAE DVFSLEVQPN
201: VDCAMIMAFV IVLDRICWKP YTPMICSS
001: MEQPYVYAYP QGSGPSGAPT PQAGGVVVDP KYCAPYPIDM AIVRKMMSLT DGNFVITDVN GNLLFKVKEP VFGLHDKRVL LDGSGTPVVT LREKMVSMHD
101: RWQVFRGGST DQRDLLYTVK RSSMLQLKTK LDVFLGHNKD EKRCDFRVKG SWLERSCVVY AGESDAIVAQ MHRKHTVQSV FLGKDNFSVT VYPNVDYAFI
201: ASLVVILDDV NREDRAA
101: RWQVFRGGST DQRDLLYTVK RSSMLQLKTK LDVFLGHNKD EKRCDFRVKG SWLERSCVVY AGESDAIVAQ MHRKHTVQSV FLGKDNFSVT VYPNVDYAFI
201: ASLVVILDDV NREDRAA
Arabidopsis Description
Protein LURP-one-related 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZX1]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.