Factsheet for TraesCS5A01G144800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G143600.1	Wheat	mitochondrion	98.33	94.76
HORVU5Hr1G046140.1	Barley	mitochondrion	96.23	94.65
TraesCS5D01G147500.1	Wheat	nucleus	98.74	94.4
Os11t0121000-00	Rice	plastid	64.44	67.25
Os12t0120500-01	Rice	plastid	64.02	67.11
EES09156	Sorghum	plastid	63.6	59.84
Zm00001d005038_P001	Maize	plastid	61.09	57.25
GSMUA_Achr7P21840_001	Banana	cytosol	43.1	50.0
GSMUA_Achr11P...	Banana	cytosol	41.84	48.78
VIT_08s0056g00130.t01	Wine grape	cytosol	47.28	47.48
GSMUA_Achr4P02400_001	Banana	cytosol	40.17	40.0
PGSC0003DMT400030793	Potato	cytosol	34.73	38.97
TraesCS5A01G145000.1	Wheat	nucleus, plastid	58.16	38.94
Solyc09g005210.2.1	Tomato	nucleus	37.66	34.35
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	25.94	30.69
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	26.36	30.58
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	26.36	30.58
TraesCS3A01G449500.1	Wheat	cytosol	21.34	30.18
TraesCS3A01G450000.1	Wheat	cytosol	24.69	30.1
TraesCS3A01G449900.1	Wheat	plastid	24.69	30.1
TraesCS3A01G449700.1	Wheat	plastid	23.43	29.02
TraesCS3A01G449800.1	Wheat	cytosol	23.85	28.93
TraesCS3A01G296300.1	Wheat	cytosol	25.94	28.18
TraesCS3A01G450200.1	Wheat	plastid	23.01	27.78
TraesCS5A01G145200.1	Wheat	cytosol	26.36	27.39
TraesCS5A01G557700.1	Wheat	cytosol	23.43	27.18
TraesCS4A01G192000.1	Wheat	cytosol	27.62	27.05
TraesCS3A01G450100.1	Wheat	cytosol	22.18	27.04
TraesCS3A01G449600.1	Wheat	mitochondrion	14.23	26.77
TraesCS2A01G113800.1	Wheat	plastid	23.01	26.32
TraesCS1A01G328100.1	Wheat	cytosol	23.85	23.46
TraesCS3A01G340900.1	Wheat	mitochondrion	25.94	22.38
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	20.92	20.58

Protein Annotations

EnsemblPlants:TraesCS5A01G144800.1	EnsemblPlantsGene:TraesCS5A01G144800	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF26	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:321001369..321002642

Molecular Weight (calculated)

26541.6 Da

IEP (calculated)

8.809

GRAVY (calculated)

-0.381

Length

239 amino acids

Sequence
(BLAST)

001: MSRIHPNAEA SRRLLRDGAG EAAACYTVWM RSSMGFQGTD GFSVYDAGGE LAFRVDNYSR RRKIFAGELT LMDGHGAPLL SLRPQIISMH DQWNCYKAPE
101: EGQAKRARSQ QLFSVRKCSV LQNNREAEVY MSSACTTTTD ASASDHGSTG HQSPGFWIEG CFRRRNCKIR RAHDGKEVAR IARKKARTAA TPDTAPLTLG
201: EDVFSLVVQP DADCTMIMAL VVVLDRICWR PYTPLICSS

Best Arabidopsis Sequence Match ( AT5G41590.1 )
(BLAST)

001: MFPFLKQRSR SVHGEDAPSS TESTVSVAAA DIGGACTTLT VWRKSLLVSC EGFTVIDSNG DLIYRVDNYA RTRPEELILM DKDGNSLLLM HRTKKITLVD
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S

Arabidopsis Description

Protein LURP-one-related 17 [Source:UniProtKB/Swiss-Prot;Acc:A0MFL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.