Factsheet for TraesCS3A01G450000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G449900.1	Wheat	plastid	94.39	94.39
TraesCS3A01G449800.1	Wheat	cytosol	88.78	88.32
TraesCS3A01G449500.1	Wheat	cytosol	75.51	87.57
HORVU3Hr1G097460.1	Barley	mitochondrion, plastid	89.29	82.55
HORVU3Hr1G097400.6	Barley	cytosol, mitochondrion, plastid	90.31	81.94
TraesCS3A01G449700.1	Wheat	plastid	80.1	81.35
TraesCS3A01G449600.1	Wheat	mitochondrion	52.55	81.1
TraesCS3A01G450200.1	Wheat	plastid	81.12	80.3
TraesCS3A01G450100.1	Wheat	cytosol	79.59	79.59
EES04157	Sorghum	plastid	67.86	66.17
Zm00001d011926_P001	Maize	cytosol	63.27	61.39
EES04156	Sorghum	plastid	66.84	60.93
Zm00001d011925_P001	Maize	cytosol	63.27	60.78
Zm00001d042239_P001	Maize	plastid	66.84	59.82
EES04155	Sorghum	cytosol	64.8	58.26
Os01t0931600-00	Rice	cytosol	61.73	56.02
TraesCS2A01G113800.1	Wheat	plastid	38.78	36.36
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	37.24	30.04
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	30.61	29.13
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	29.59	28.71
TraesCS5A01G145200.1	Wheat	cytosol	32.65	27.83
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	28.57	27.18
TraesCS5A01G557700.1	Wheat	cytosol	26.02	24.76
TraesCS5A01G144800.1	Wheat	nucleus	30.1	24.69
TraesCS4A01G192000.1	Wheat	cytosol	30.1	24.18
TraesCS3A01G296300.1	Wheat	cytosol	26.53	23.64
TraesCS3A01G340900.1	Wheat	mitochondrion	30.61	21.66
TraesCS1A01G328100.1	Wheat	cytosol	26.53	21.4
TraesCS5A01G145000.1	Wheat	nucleus, plastid	31.12	17.09

Protein Annotations

EnsemblPlants:TraesCS3A01G450000.1	EnsemblPlantsGene:TraesCS3A01G450000	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:688986445..688987035

Molecular Weight (calculated)

21261.4 Da

IEP (calculated)

8.370

GRAVY (calculated)

-0.114

Length

196 amino acids

Sequence
(BLAST)

001: MAKIQPLAAA ASPSSSDDQW RQQAYTVWMK SLVFNGNGCT VYGPDGAVAF RVDNYGCRGG REVFFMDRAG NALIRIRRKG FGMFRRWEVC QCAHNGGQEE
101: EATPWFSVRR AEKDGAAVAM HGGAGTCYTI DGCSARKSEY RVRGVDGAVV AEVARKQTPA GVVLGDDVLT LTVAPEVDHL LFLGLVVVRG LIDRSL

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.