Factsheet for TraesCS5A01G145000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G147400.1	Wheat	plastid	70.31	95.44
TraesCS5B01G143700.1	Wheat	plastid	69.19	93.56
HORVU5Hr1G046160.1	Barley	mitochondrion	80.11	75.26
Zm00001d023305_P001	Maize	plastid	44.54	60.0
TraesCS5A01G144800.1	Wheat	nucleus	38.94	58.16
Zm00001d044670_P001	Maize	nucleus	43.98	56.27
GSMUA_Achr11P...	Banana	cytosol	30.81	53.66
EES15616	Sorghum	plastid	46.78	53.53
GSMUA_Achr7P21840_001	Banana	cytosol	29.41	50.97
VIT_08s0056g00130.t01	Wine grape	cytosol	29.69	44.54
GSMUA_Achr4P02400_001	Banana	cytosol	29.41	43.75
PGSC0003DMT400030793	Potato	cytosol	24.09	40.38
Solyc09g005210.2.1	Tomato	nucleus	27.73	37.79
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	18.21	31.55
TraesCS3A01G296300.1	Wheat	cytosol	19.33	31.36
TraesCS5A01G145200.1	Wheat	cytosol	20.17	31.3
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	17.65	31.19
TraesCS3A01G450000.1	Wheat	cytosol	17.09	31.12
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	17.65	30.58
TraesCS3A01G449800.1	Wheat	cytosol	16.81	30.46
TraesCS3A01G449500.1	Wheat	cytosol	14.29	30.18
TraesCS3A01G449900.1	Wheat	plastid	16.53	30.1
TraesCS3A01G450100.1	Wheat	cytosol	16.25	29.59
TraesCS3A01G449700.1	Wheat	plastid	15.97	29.53
TraesCS2A01G113800.1	Wheat	plastid	17.09	29.19
TraesCS3A01G450200.1	Wheat	plastid	15.97	28.79
TraesCS5A01G557700.1	Wheat	cytosol	16.25	28.16
TraesCS3A01G449600.1	Wheat	mitochondrion	9.8	27.56
TraesCS1A01G328100.1	Wheat	cytosol	18.49	27.16
TraesCS4A01G192000.1	Wheat	cytosol	18.49	27.05
TraesCS3A01G340900.1	Wheat	mitochondrion	18.21	23.47
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	14.29	20.99

Protein Annotations

EnsemblPlants:TraesCS5A01G145000.1	EnsemblPlantsGene:TraesCS5A01G145000	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF26	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:321019521..321020707

Molecular Weight (calculated)

38818.3 Da

IEP (calculated)

11.291

GRAVY (calculated)

-0.564

Length

357 amino acids

Sequence
(BLAST)

001: MRVCLDSKKK NPQPFSIERP PPHDTRTPTP RSIHSTRART RTRYTNRNRL ARAHARFSLH KSRAKHHAGS RPSHSHLSIH RAPPAACPPA RMCLLLSGST
101: SGPASMSRIH PSDRGDGARR AARTAAAAER ERQQPAVYTV WKRSSMGFQG TDGFSVYDAA GRLAFRVDNY ARRPKAFAGE LLLMDGRGAP LLSLRPQIFS
201: LHDRWNCYRV APGEEGCPET DKSSSAQQLF SMRKCAALQS TDDAEVHMST TSAATTSGRG CRAPPSPPSG YRVEGCFSRR SCKITRSDGQ EAARILRKKA
301: GGPTAAAASS SRPVALGDDV FSLVVRPGVD AATVMAIVVV MDRICRKPYA PMACSAQ

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.