Factsheet for Zm00001d044670_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023305_P001	Maize	plastid	80.29	84.53
EES15616	Sorghum	plastid	80.29	71.79
TraesCS5D01G147400.1	Wheat	plastid	56.27	59.7
TraesCS5B01G143700.1	Wheat	plastid	55.91	59.09
Zm00001d052373_P001	Maize	plastid	49.1	52.09
Zm00001d005038_P001	Maize	plastid	45.88	50.2
GSMUA_Achr11P...	Banana	cytosol	36.2	49.27
GSMUA_Achr7P21840_001	Banana	cytosol	35.13	47.57
TraesCS5A01G145000.1	Wheat	nucleus, plastid	56.27	43.98
VIT_08s0056g00130.t01	Wine grape	cytosol	36.56	42.86
HORVU5Hr1G046160.1	Barley	mitochondrion	56.27	41.32
PGSC0003DMT400030793	Potato	cytosol	31.54	41.31
Solyc09g005210.2.1	Tomato	nucleus	35.48	37.79
GSMUA_Achr4P02400_001	Banana	cytosol	32.26	37.5
Zm00001d052371_P001	Maize	cytosol	27.24	34.55
Zm00001d043087_P001	Maize	cytosol, extracellular, plastid	26.16	34.43
Zm00001d044671_P001	Maize	cytosol	26.16	33.49
Zm00001d044474_P001	Maize	cytosol	28.67	33.33
Zm00001d012520_P001	Maize	cytosol	23.66	32.04
Zm00001d043318_P001	Maize	cytosol	25.09	31.39
Zm00001d010627_P001	Maize	cytosol, plastid	24.37	30.09
Zm00001d011926_P001	Maize	cytosol	21.51	29.7
Zm00001d038514_P001	Maize	plastid	24.01	29.65
Zm00001d011925_P001	Maize	cytosol	20.79	28.43
Zm00001d042237_P001	Maize	mitochondrion	22.22	27.68
Zm00001d042239_P001	Maize	plastid	21.51	27.4
Zm00001d000310_P001	Maize	cytosol	22.94	26.23
Zm00001d052372_P002	Maize	plastid	27.6	24.44
Zm00001d011924_P001	Maize	plastid	20.07	23.63
Zm00001d029119_P001	Maize	mitochondrion	20.43	23.08

Protein Annotations

EnsemblPlants:Zm00001d044670_P001	EnsemblPlants:Zm00001d044670_T001	EnsemblPlantsGene:Zm00001d044670	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF26	PFAM:PF04525
ProteinID:ONM42225.1	SEG:seg	SUPFAM:SSF54518	UniParc:UPI00084402B4	UniProt:A0A1D6NQL9	MapMan:35.2

Description

Protein LURP-one-related 2

Coordinates

chr3:+:234490778..234492214

Molecular Weight (calculated)

30015.6 Da

IEP (calculated)

10.403

GRAVY (calculated)

-0.366

Length

279 amino acids

Sequence
(BLAST)

001: MSTRIHPSSS DAAGRARLRA AEERERERRP AVYTVWKRSS MGFQGTDGFC VYDDAGGLAF RVDNYSRRRK LCAGELLLMD GTGTPLLSLR PQRFGQIKHK
101: LTTTAAANQG AKNAVQQLLS LHDRWNCYTA TEDAAVDKKT TSPAQQQVFT MSRCSALRSS DDAEVHMAGS AAAAASSSSL SCKRPQAVAA AAPGYRVEGS
201: FSGRSCKIRR GSDGREAARV TRKSAGVASR PAATLGDDVF SLVVQPGVDV ATVMAIVVVM DRICRRRPYT PMVCSSSSQ

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.