Factsheet for GSMUA_Achr7P21840_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	78.16	78.54
GSMUA_Achr4P02400_001	Banana	cytosol	66.02	56.67
Os11t0121000-00	Rice	plastid	50.0	44.98
VIT_08s0056g00130.t01	Wine grape	cytosol	51.46	44.54
Os12t0120500-01	Rice	plastid	49.03	44.3
TraesCS5A01G144800.1	Wheat	nucleus	50.0	43.1
EES09156	Sorghum	plastid	51.94	42.13
HORVU5Hr1G046140.1	Barley	mitochondrion	49.03	41.56
TraesCS5D01G147500.1	Wheat	nucleus	50.0	41.2
TraesCS5B01G143600.1	Wheat	mitochondrion	49.51	41.13
TraesCS5D01G147400.1	Wheat	plastid	51.46	40.3
TraesCS5B01G143700.1	Wheat	plastid	51.46	40.15
Zm00001d005038_P001	Maize	plastid	49.03	39.61
Zm00001d052373_P001	Maize	plastid	49.51	38.78
Zm00001d023305_P001	Maize	plastid	49.03	38.11
EES09154	Sorghum	plastid	51.46	37.06
Zm00001d044670_P001	Maize	nucleus	47.57	35.13
PGSC0003DMT400030793	Potato	cytosol	33.98	32.86
EES15616	Sorghum	plastid	49.03	32.37
GSMUA_Achr3P13680_001	Banana	cytosol	20.39	32.06
Solyc09g005210.2.1	Tomato	nucleus	39.81	31.3
GSMUA_Achr7P21880_001	Banana	cytosol	30.1	30.69
GSMUA_Achr11P...	Banana	cytosol	29.13	30.3
GSMUA_Achr6P32380_001	Banana	cytosol	28.64	30.1
TraesCS5A01G145000.1	Wheat	nucleus, plastid	50.97	29.41
GSMUA_Achr5P07550_001	Banana	cytosol	29.61	28.64
HORVU5Hr1G046160.1	Barley	mitochondrion	52.43	28.42
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	28.64	28.37
GSMUA_Achr6P15880_001	Banana	plastid	27.67	28.08
GSMUA_Achr10P...	Banana	plastid	27.67	27.27
GSMUA_Achr3P09620_001	Banana	nucleus	28.16	27.23
GSMUA_Achr11P...	Banana	cytosol	30.58	26.81
GSMUA_Achr9P16860_001	Banana	cytosol	28.64	20.14
GSMUA_Achr3P24000_001	Banana	nucleus	30.1	7.51

Protein Annotations

EnsemblPlants:GSMUA_Achr7P21840_001	EnsemblPlants:GSMUA_Achr7T21840_001	EnsemblPlantsGene:GSMUA_Achr7G21840_001	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF26	PFAM:PF04525
SEG:seg	SUPFAM:SSF54518	UniParc:UPI000296B4F8	UniProt:M0TJM0	MapMan:35.1	:

Description

Putative Protein LURP-one-related 8 [Source:GMGC_GENE;Acc:GSMUA_Achr7G21840_001]

Coordinates

chr7:+:24508441..24509994

Molecular Weight (calculated)

23624.4 Da

IEP (calculated)

8.741

GRAVY (calculated)

-0.497

Length

206 amino acids

Sequence
(BLAST)

001: MPRVHPTLRM TDDDEELATT TARPSIWTVW NKSSMGFHGT DGFSIYDSKG RLAFRVDNYS RKHKCFAGQL LLMDANGKAL MALRPRILSM HDRWSGFKGE
101: DGLDPKCRTH VFSMKRRSIL QGRDKAEVYM DSPDDRSSLP HFKTEGCFRR RDCKILDSNG EEVAQISHKK VNRSVTLGDD VFSLIIQPYT DTELIMAFLV
201: IMDRIC

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.