Factsheet for GSMUA_Achr4P02410_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plastid 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P21880_001	Banana	cytosol	68.27	70.3
GSMUA_Achr11P...	Banana	cytosol	66.83	70.2
GSMUA_Achr10P...	Banana	plastid	65.87	65.55
GSMUA_Achr6P32380_001	Banana	cytosol	57.21	60.71
GSMUA_Achr11P...	Banana	cytosol	66.35	58.72
VIT_08s0032g00760.t01	Wine grape	cytosol	55.77	58.0
GSMUA_Achr5P07550_001	Banana	cytosol	58.65	57.28
GSMUA_Achr3P09620_001	Banana	nucleus	58.17	56.81
GSMUA_Achr6P15880_001	Banana	plastid	54.81	56.16
VIT_08s0056g00180.t01	Wine grape	cytosol	57.69	55.56
HORVU4Hr1G047270.1	Barley	cytosol, extracellular, peroxisome	52.4	53.43
TraesCS3D01G334200.1	Wheat	cytosol	51.92	53.2
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	52.4	52.91
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	51.44	52.71
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	50.96	52.48
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	51.44	52.2
Os01t0817650-00	Rice	cytosol, extracellular, plastid	53.37	52.11
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	51.44	51.94
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	51.92	51.92
HORVU1Hr1G069180.1	Barley	cytosol, extracellular, plasma membrane	51.44	51.44
EES01655	Sorghum	cytosol	51.44	51.2
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	50.48	50.97
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	50.48	50.48
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	50.48	50.24
TraesCS3B01G372400.1	Wheat	plastid	49.52	50.0
TraesCS5D01G147200.1	Wheat	cytosol	54.33	49.56
TraesCS5B01G144000.1	Wheat	cytosol	54.33	49.56
Zm00001d043087_P001	Maize	cytosol, extracellular, plastid	50.0	49.06
TraesCS4B01G396800.1	Wheat	plastid	50.0	49.06
Zm00001d012520_P001	Maize	cytosol	48.08	48.54
Os11t0120300-01	Rice	cytosol	51.44	48.42
CDX93313	Canola	cytosol	45.19	47.96
TraesCS5A01G145200.1	Wheat	cytosol	52.88	47.83
Os12t0120100-01	Rice	cytosol	50.96	47.75
Zm00001d044671_P001	Maize	cytosol	50.0	47.71
HORVU5Hr1G046200.1	Barley	cytosol	53.37	47.64
TraesCSU01G031000.1	Wheat	cytosol	48.08	47.62
TraesCS5A01G557700.1	Wheat	cytosol	47.12	47.57
CDY18377	Canola	cytosol	44.71	47.45
Bra017111.1-P	Field mustard	cytosol	44.71	47.45
AT2G38640.1	Thale cress	cytosol	44.71	47.45
Zm00001d038514_P001	Maize	plastid	51.44	47.35
EES19708	Sorghum	plastid	50.96	47.32
KRH09578	Soybean	cytosol	47.12	47.12
EES16590	Sorghum	cytosol	50.96	47.11
Os05t0311500-01	Rice	cytosol	48.56	46.98
CDX91482	Canola	cytosol	43.75	46.67
Os05t0484800-01	Rice	plastid	52.4	46.58
HORVU3Hr1G080430.1	Barley	plastid	52.4	46.58
Zm00001d010627_P001	Maize	cytosol, plastid	50.48	46.46
CDY62436	Canola	cytosol	43.75	46.43
Zm00001d052371_P001	Maize	cytosol	49.04	46.36
CDY07714	Canola	cytosol	43.27	46.15
CDY62435	Canola	cytosol	43.27	46.15
EES15617	Sorghum	cytosol	50.96	46.09
CDY07715	Canola	cytosol	43.27	45.92
CDY60759	Canola	cytosol	42.79	45.64
Bra005092.1-P	Field mustard	cytosol	42.79	45.64
Bra000080.1-P	Field mustard	cytosol	42.79	45.64
Bra000079.1-P	Field mustard	cytosol	42.79	45.41
EES09153	Sorghum	cytosol	50.48	45.06
HORVU4Hr1G024080.1	Barley	cytosol	51.92	44.26
Zm00001d044474_P001	Maize	cytosol	50.48	43.75
TraesCS4B01G123400.1	Wheat	cytosol	50.96	43.44
TraesCS4A01G192000.1	Wheat	cytosol	50.48	43.03
TraesCS4D01G121500.1	Wheat	cytosol	50.0	42.62
GSMUA_Achr9P16860_001	Banana	cytosol	59.62	42.32
EES16588	Sorghum	cytosol, nucleus, plastid	48.56	42.08
EES09152	Sorghum	plastid	46.63	38.8
TraesCS3A01G340900.1	Wheat	mitochondrion	50.96	38.27
HORVU3Hr1G080440.1	Barley	plastid	50.48	36.71
GSMUA_Achr3P13680_001	Banana	cytosol	22.12	35.11
Zm00001d052372_P002	Maize	plastid	47.6	31.43
GSMUA_Achr11P...	Banana	cytosol	29.33	29.76
GSMUA_Achr7P21840_001	Banana	cytosol	28.37	28.64
HORVU4Hr1G089220.1	Barley	plasma membrane	31.25	24.81
GSMUA_Achr4P02400_001	Banana	cytosol	25.48	22.08
GSMUA_Achr3P24000_001	Banana	nucleus	28.37	7.14

Protein Annotations

EnsemblPlants:GSMUA_Achr4P02410_001	EnsemblPlants:GSMUA_Achr4T02410_001	EnsemblPlantsGene:GSMUA_Achr4G02410_001	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF22	PFAM:PF04525
SEG:seg	SUPFAM:SSF54518	UniParc:UPI000296AF17	UniProt:M0SKF8	MapMan:35.1	:

Description

Putative Protein LURP-one-related 8 [Source:GMGC_GENE;Acc:GSMUA_Achr4G02410_001]

Coordinates

chr4:+:2132371..2133068

Molecular Weight (calculated)

22394.9 Da

IEP (calculated)

8.204

GRAVY (calculated)

-0.076

Length

208 amino acids

Sequence
(BLAST)

001: MTRKVHPNAA APAREPPRIA SCCGGDDAWG KDSAAVLTVW RKSLLFSCSG FTVFDAKGDL VFRVETYGSG TAGELVLMDA AGKPLLTLRR KRLSLGENWL
101: IYDGEDAGNP LYSVRKHVNL RRCKALAHVT PCGSDGCGGY EVEGSYSRRS CTVFDDRGRA VAEVQQKEAV GGVAFGGEVF RLVVQPDMNA CLAMAVLIVL
201: DQMFGSRS

Best Arabidopsis Sequence Match ( AT5G41590.1 )
(BLAST)

001: MFPFLKQRSR SVHGEDAPSS TESTVSVAAA DIGGACTTLT VWRKSLLVSC EGFTVIDSNG DLIYRVDNYA RTRPEELILM DKDGNSLLLM HRTKKITLVD
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S

Arabidopsis Description

Protein LURP-one-related 17 [Source:UniProtKB/Swiss-Prot;Acc:A0MFL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.