Factsheet for GSMUA_Achr6P15880_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P07550_001	Banana	cytosol	72.41	69.01
GSMUA_Achr6P32380_001	Banana	cytosol	64.53	66.84
GSMUA_Achr3P09620_001	Banana	nucleus	64.53	61.5
GSMUA_Achr11P...	Banana	cytosol	58.13	59.6
VIT_08s0032g00760.t01	Wine grape	cytosol	58.13	59.0
VIT_08s0056g00180.t01	Wine grape	cytosol	59.11	55.56
GSMUA_Achr7P21880_001	Banana	cytosol	55.17	55.45
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	56.16	54.81
GSMUA_Achr10P...	Banana	plastid	51.23	49.76
KRH09578	Soybean	cytosol	50.74	49.52
GSMUA_Achr11P...	Banana	cytosol	55.66	48.09
CDY07714	Canola	cytosol	45.81	47.69
CDY62435	Canola	cytosol	45.81	47.69
Bra000079.1-P	Field mustard	cytosol	45.81	47.45
CDY62436	Canola	cytosol	45.81	47.45
GSMUA_Achr9P16860_001	Banana	cytosol	68.47	47.44
Bra000080.1-P	Field mustard	cytosol	45.32	47.18
CDY18377	Canola	cytosol	45.32	46.94
CDY07715	Canola	cytosol	45.32	46.94
Bra017111.1-P	Field mustard	cytosol	45.32	46.94
CDX93313	Canola	cytosol	44.83	46.43
CDY60759	Canola	cytosol	44.34	46.15
CDX91482	Canola	cytosol	44.34	46.15
Bra005092.1-P	Field mustard	cytosol	44.34	46.15
AT2G38640.1	Thale cress	cytosol	44.34	45.92
GSMUA_Achr3P13680_001	Banana	cytosol	22.66	35.11
GSMUA_Achr11P...	Banana	cytosol	28.08	27.8
GSMUA_Achr7P21840_001	Banana	cytosol	28.08	27.67
GSMUA_Achr4P02400_001	Banana	cytosol	23.15	19.58
GSMUA_Achr3P24000_001	Banana	nucleus	29.56	7.26

Protein Annotations

EnsemblPlants:GSMUA_Achr6P15880_001	EnsemblPlants:GSMUA_Achr6T15880_001	EnsemblPlantsGene:GSMUA_Achr6G15880_001	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF22	PFAM:PF04525
PFscan:PS51257	SEG:seg	SUPFAM:SSF54518	UniParc:UPI000294F4EB	UniProt:M0T7D6	MapMan:35.1

Description

Putative Protein LURP-one-related 8 [Source:GMGC_GENE;Acc:GSMUA_Achr6G15880_001]

Coordinates

chr6:-:10614170..10615077

Molecular Weight (calculated)

21884.8 Da

IEP (calculated)

10.091

GRAVY (calculated)

0.090

Length

203 amino acids

Sequence
(BLAST)

001: MAKVHPSAAA AAAAAAACTG GGGVRPAAVL TVWRRSLLFN GNGFAVFDAK GNLVFRVDNY ASGSKAEVLL MDAAGKPLLT IRRKKLSLKD QWLIYEGEEA
101: ANPRFAAKRH VSLLHHGALA HVTPCVSGAK PCHAYEIQGS YLQRCCAVVD DKRRQLMEIK RKEPAKGITF GLDVFRLIVQ PGFDTSFAMA IVMLLEQMFG
201: SPS

Best Arabidopsis Sequence Match ( AT5G41590.1 )
(BLAST)

001: MFPFLKQRSR SVHGEDAPSS TESTVSVAAA DIGGACTTLT VWRKSLLVSC EGFTVIDSNG DLIYRVDNYA RTRPEELILM DKDGNSLLLM HRTKKITLVD
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S

Arabidopsis Description

Protein LURP-one-related 17 [Source:UniProtKB/Swiss-Prot;Acc:A0MFL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.