Factsheet for GSMUA_Achr3P09620_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P07550_001	Banana	cytosol	78.4	78.4
GSMUA_Achr6P32380_001	Banana	cytosol	63.38	68.88
GSMUA_Achr6P15880_001	Banana	plastid	61.5	64.53
GSMUA_Achr11P...	Banana	cytosol	54.93	59.09
GSMUA_Achr9P16860_001	Banana	cytosol	81.22	59.04
VIT_08s0032g00760.t01	Wine grape	cytosol	54.93	58.5
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	56.81	58.17
GSMUA_Achr7P21880_001	Banana	cytosol	53.99	56.93
VIT_08s0056g00180.t01	Wine grape	cytosol	57.28	56.48
GSMUA_Achr10P...	Banana	plastid	52.11	53.11
GSMUA_Achr11P...	Banana	cytosol	58.22	52.77
CDY62436	Canola	cytosol	46.48	50.51
CDX91482	Canola	cytosol	46.01	50.26
CDY07715	Canola	cytosol	46.01	50.0
Bra005092.1-P	Field mustard	cytosol	45.54	49.74
Bra000079.1-P	Field mustard	cytosol	45.54	49.49
CDY62435	Canola	cytosol	45.07	49.23
CDY60759	Canola	cytosol	45.07	49.23
CDY07714	Canola	cytosol	45.07	49.23
CDY18377	Canola	cytosol	45.07	48.98
Bra017111.1-P	Field mustard	cytosol	45.07	48.98
Bra000080.1-P	Field mustard	cytosol	44.6	48.72
CDX93313	Canola	cytosol	44.6	48.47
AT2G38640.1	Thale cress	cytosol	44.6	48.47
KRH09578	Soybean	cytosol	45.54	46.63
GSMUA_Achr3P13680_001	Banana	cytosol	21.6	35.11
GSMUA_Achr7P21840_001	Banana	cytosol	27.23	28.16
GSMUA_Achr11P...	Banana	cytosol	25.35	26.34
GSMUA_Achr4P02400_001	Banana	cytosol	20.66	18.33
GSMUA_Achr3P24000_001	Banana	nucleus	33.8	8.72

Protein Annotations

EnsemblPlants:GSMUA_Achr3P09620_001	EnsemblPlants:GSMUA_Achr3T09620_001	EnsemblPlantsGene:GSMUA_Achr3G09620_001	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF22	PFAM:PF04525
SEG:seg	SUPFAM:SSF54518	UniParc:UPI0002958228	UniProt:M0SD79	MapMan:35.1	:

Description

Putative Protein LURP-one-related 8 [Source:GMGC_GENE;Acc:GSMUA_Achr3G09620_001]

Coordinates

chr3:+:6955393..6956962

Molecular Weight (calculated)

23417.3 Da

IEP (calculated)

10.036

GRAVY (calculated)

-0.269

Length

213 amino acids

Sequence
(BLAST)

001: MTKVHPHATA AEEPPRPESP RAGGGRAAAE ATVLTVWRKS LLFNGNGFTV FDSKGHLVFR VDNYSSGSRD CIVLMDAAGK PLLTIRRKKL SLGEHWRIYD
101: GEEAINPRFA VKKKHTGLLH SKGLARVTPC ASGTESRLAY DAEGSYSRRC CAIYDSRRRQ LAEIQKKESA QGISLGLDVF RLVVEPELDA AFAMAMVILL
201: EQMFGSRGSL LRG

Best Arabidopsis Sequence Match ( AT3G15810.1 )
(BLAST)

001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED

Arabidopsis Description

Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.