Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07714 | Canola | cytosol | 99.49 | 99.49 |
| Bra000080.1-P | Field mustard | cytosol | 98.97 | 98.97 |
| CDY07715 | Canola | cytosol | 96.41 | 95.92 |
| CDY62436 | Canola | cytosol | 95.9 | 95.41 |
| CDY18377 | Canola | cytosol | 88.21 | 87.76 |
| CDX93313 | Canola | cytosol | 87.18 | 86.73 |
| CDX91482 | Canola | cytosol | 86.15 | 86.15 |
| CDY60759 | Canola | cytosol | 85.64 | 85.64 |
| AT2G38640.1 | Thale cress | cytosol | 85.13 | 84.69 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 54.36 | 53.0 |
| GSMUA_Achr11P... | Banana | cytosol | 50.77 | 50.0 |
| GSMUA_Achr6P32380_001 | Banana | cytosol | 50.26 | 50.0 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 54.36 | 49.07 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 48.21 | 46.53 |
| KRH09578 | Soybean | cytosol | 49.23 | 46.15 |
| GSMUA_Achr6P15880_001 | Banana | plastid | 47.69 | 45.81 |
| GSMUA_Achr5P07550_001 | Banana | cytosol | 49.23 | 45.07 |
| GSMUA_Achr3P09620_001 | Banana | nucleus | 49.23 | 45.07 |
| GSMUA_Achr10P... | Banana | plastid | 47.69 | 44.5 |
| TraesCSU01G031000.1 | Wheat | cytosol | 47.18 | 43.81 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 46.15 | 43.27 |
| GSMUA_Achr11P... | Banana | cytosol | 51.79 | 42.98 |
| TraesCS4B01G396800.1 | Wheat | plastid | 46.67 | 42.92 |
| TraesCS5A01G557700.1 | Wheat | cytosol | 45.13 | 42.72 |
| Os05t0311500-01 | Rice | cytosol | 44.62 | 40.47 |
| HORVU1Hr1G069180.1 | Barley | cytosol, extracellular, plasma membrane | 42.56 | 39.9 |
| TraesCS1A01G303600.1 | Wheat | extracellular, plasma membrane | 42.05 | 39.81 |
| TraesCS1B01G314000.1 | Wheat | extracellular, plasma membrane | 42.05 | 39.42 |
| TraesCS1D01G303100.1 | Wheat | extracellular, plasma membrane | 42.05 | 39.23 |
| TraesCS3A01G340700.1 | Wheat | cytosol, extracellular, peroxisome | 40.51 | 39.11 |
| TraesCS3D01G334400.1 | Wheat | cytosol, extracellular, peroxisome | 41.03 | 38.84 |
| TraesCS3B01G372400.1 | Wheat | plastid | 41.03 | 38.84 |
| TraesCS3A01G340800.1 | Wheat | cytosol, extracellular, peroxisome | 41.03 | 38.84 |
| TraesCS3D01G334300.1 | Wheat | cytosol, extracellular, peroxisome | 41.03 | 38.46 |
| TraesCS3B01G372600.1 | Wheat | cytosol, extracellular, peroxisome | 40.0 | 38.05 |
| Os01t0817650-00 | Rice | cytosol, extracellular, plastid | 41.54 | 38.03 |
| TraesCS3D01G334200.1 | Wheat | cytosol | 39.49 | 37.93 |
| TraesCS3B01G372300.1 | Wheat | cytosol, peroxisome, plastid | 39.49 | 37.93 |
| HORVU4Hr1G047270.1 | Barley | cytosol, extracellular, peroxisome | 39.49 | 37.75 |
| EES16590 | Sorghum | cytosol | 43.08 | 37.33 |
| EES01655 | Sorghum | cytosol | 40.0 | 37.32 |
| TraesCS5B01G144000.1 | Wheat | cytosol | 43.59 | 37.28 |
| Zm00001d044671_P001 | Maize | cytosol | 41.54 | 37.16 |
| Os11t0120300-01 | Rice | cytosol | 42.05 | 37.1 |
| EES09153 | Sorghum | cytosol | 44.1 | 36.91 |
| EES19708 | Sorghum | plastid | 42.05 | 36.61 |
| EES15617 | Sorghum | cytosol | 43.08 | 36.52 |
| Os12t0120100-01 | Rice | cytosol | 41.54 | 36.49 |
| Zm00001d052371_P001 | Maize | cytosol | 41.03 | 36.36 |
| CDY37567 | Canola | cytosol | 38.97 | 36.19 |
| CDY41119 | Canola | cytosol | 38.97 | 36.19 |
| TraesCS5D01G147200.1 | Wheat | cytosol | 42.05 | 35.96 |
| Zm00001d038514_P001 | Maize | plastid | 41.54 | 35.84 |
| Os05t0484800-01 | Rice | plastid | 42.56 | 35.47 |
| TraesCS5A01G145200.1 | Wheat | cytosol | 41.54 | 35.22 |
| HORVU5Hr1G046200.1 | Barley | cytosol | 42.05 | 35.19 |
| EES16588 | Sorghum | cytosol, nucleus, plastid | 43.08 | 35.0 |
| Zm00001d010627_P001 | Maize | cytosol, plastid | 40.51 | 34.96 |
| Zm00001d043087_P001 | Maize | cytosol, extracellular, plastid | 37.95 | 34.91 |
| Zm00001d012520_P001 | Maize | cytosol | 36.41 | 34.47 |
| GSMUA_Achr9P16860_001 | Banana | cytosol | 49.74 | 33.11 |
| Zm00001d044474_P001 | Maize | cytosol | 40.51 | 32.92 |
| HORVU3Hr1G080430.1 | Barley | plastid | 39.49 | 32.91 |
| HORVU4Hr1G024080.1 | Barley | cytosol | 38.97 | 31.15 |
| TraesCS4B01G123400.1 | Wheat | cytosol | 38.46 | 30.74 |
| TraesCS4D01G121500.1 | Wheat | cytosol | 38.46 | 30.74 |
| TraesCS4A01G192000.1 | Wheat | cytosol | 37.95 | 30.33 |
| CDY30113 | Canola | cytosol | 32.82 | 29.22 |
| CDX87294 | Canola | cytosol | 38.46 | 29.18 |
| EES09152 | Sorghum | plastid | 36.92 | 28.8 |
| CDY58464 | Canola | cytosol | 31.28 | 28.64 |
| CDX75845 | Canola | cytosol | 31.28 | 28.64 |
| TraesCS3A01G340900.1 | Wheat | mitochondrion | 40.0 | 28.16 |
| CDY45367 | Canola | cytosol | 22.05 | 27.92 |
| HORVU3Hr1G080440.1 | Barley | plastid | 40.0 | 27.27 |
| Zm00001d052372_P002 | Maize | plastid | 41.54 | 25.71 |
| CDY49893 | Canola | cytosol | 25.13 | 25.65 |
| CDY24068 | Canola | peroxisome | 25.64 | 24.88 |
| CDY71164 | Canola | cytosol, extracellular, peroxisome | 24.1 | 24.48 |
| CDY24067 | Canola | cytosol | 25.13 | 24.38 |
| CDX75761 | Canola | cytosol | 28.72 | 24.35 |
| CDY67855 | Canola | peroxisome | 28.72 | 24.35 |
| CDY33238 | Canola | cytosol, peroxisome, plastid | 28.72 | 24.35 |
| CDX82489 | Canola | cytosol | 28.21 | 23.91 |
| HORVU4Hr1G089220.1 | Barley | plasma membrane | 28.21 | 20.99 |
| CDY24069 | Canola | cytosol | 18.46 | 20.57 |
| CDY36612 | Canola | cytosol | 13.85 | 19.85 |
| CDY36610 | Canola | cytosol | 14.36 | 18.92 |
Protein Annotations
| EnsemblPlants:CDY62435 | EnsemblPlantsGene:GSBRNA2T00036266001 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF22 | PFAM:PF04525 | ProteinID:CDY62435 |
| ProteinID:CDY62435.1 | SUPFAM:SSF54518 | UniParc:UPI0004EAFA17 | UniProt:A0A078JDC2 | MapMan:35.1 | : |
Description
BnaC03g72170DBnaC03g72170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDC2]
Coordinates
chrLK034143:+:15775..16547
Molecular Weight (calculated)
22023.8 Da
IEP (calculated)
9.913
GRAVY (calculated)
-0.244
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKVHPKFPN TYEESLCDSK AAVVLTVWRK SLLFNCDGFT VYNSNGNLVF RVDNYMNSPK DNIVLMDASG LPLLSIRRKK LSLGDCWAVY DGETQRDPIF
101: TAKKNVSILT NKRSLAWVSA KKTILYEVEG SYGQKSCKIV DVRNKKKTAE IKRKDAMVGG GSFGKDVFKL IVESDMEPRV AMALTIILDQ MFRSY
101: TAKKNVSILT NKRSLAWVSA KKTILYEVEG SYGQKSCKIV DVRNKKKTAE IKRKDAMVGG GSFGKDVFKL IVESDMEPRV AMALTIILDQ MFRSY
001: MFPFLKQRSR SVHGEDAPSS TESTVSVAAA DIGGACTTLT VWRKSLLVSC EGFTVIDSNG DLIYRVDNYA RTRPEELILM DKDGNSLLLM HRTKKITLVD
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S
Arabidopsis Description
Protein LURP-one-related 17 [Source:UniProtKB/Swiss-Prot;Acc:A0MFL4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.