Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES09153 | Sorghum | cytosol | 78.64 | 74.25 |
| Os11t0120300-01 | Rice | cytosol | 62.73 | 62.44 |
| Zm00001d044671_P001 | Maize | cytosol | 61.36 | 61.93 |
| Os12t0120100-01 | Rice | cytosol | 62.27 | 61.71 |
| TraesCS5D01G147200.1 | Wheat | cytosol | 63.18 | 60.96 |
| TraesCS5B01G144000.1 | Wheat | cytosol | 62.73 | 60.53 |
| Zm00001d052372_P002 | Maize | plastid | 85.91 | 60.0 |
| TraesCS5A01G145200.1 | Wheat | cytosol | 62.27 | 59.57 |
| HORVU5Hr1G046200.1 | Barley | cytosol | 60.91 | 57.51 |
| Zm00001d044474_P001 | Maize | cytosol | 61.82 | 56.67 |
| TraesCS4D01G121500.1 | Wheat | cytosol | 60.45 | 54.51 |
| TraesCS4B01G123400.1 | Wheat | cytosol | 60.45 | 54.51 |
| TraesCS4A01G192000.1 | Wheat | cytosol | 60.0 | 54.1 |
| HORVU4Hr1G024080.1 | Barley | cytosol | 60.0 | 54.1 |
| Zm00001d043087_P001 | Maize | cytosol, extracellular, plastid | 50.45 | 52.36 |
| GSMUA_Achr11P... | Banana | cytosol | 45.0 | 50.0 |
| Zm00001d012520_P001 | Maize | cytosol | 46.36 | 49.51 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 46.36 | 49.04 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 45.0 | 49.01 |
| Zm00001d038514_P001 | Maize | plastid | 50.0 | 48.67 |
| Zm00001d010627_P001 | Maize | cytosol, plastid | 50.0 | 48.67 |
| GSMUA_Achr10P... | Banana | plastid | 45.91 | 48.33 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 43.18 | 47.5 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 43.18 | 43.98 |
| AT2G38640.1 | Thale cress | cytosol | 38.18 | 42.86 |
| GSMUA_Achr11P... | Banana | cytosol | 45.45 | 42.55 |
| CDY62436 | Canola | cytosol | 37.27 | 41.84 |
| CDY07715 | Canola | cytosol | 37.27 | 41.84 |
| Bra000079.1-P | Field mustard | cytosol | 36.82 | 41.33 |
| CDY62435 | Canola | cytosol | 36.36 | 41.03 |
| CDX91482 | Canola | cytosol | 36.36 | 41.03 |
| CDY07714 | Canola | cytosol | 36.36 | 41.03 |
| CDY18377 | Canola | cytosol | 36.36 | 40.82 |
| CDX93313 | Canola | cytosol | 36.36 | 40.82 |
| Bra017111.1-P | Field mustard | cytosol | 36.36 | 40.82 |
| Bra000080.1-P | Field mustard | cytosol | 35.91 | 40.51 |
| Bra005092.1-P | Field mustard | cytosol | 35.91 | 40.51 |
| CDY60759 | Canola | cytosol | 35.0 | 39.49 |
| KRH09578 | Soybean | cytosol | 36.82 | 38.94 |
| Zm00001d011925_P001 | Maize | cytosol | 27.27 | 29.41 |
| Zm00001d023305_P001 | Maize | plastid | 34.09 | 28.3 |
| Zm00001d043318_P001 | Maize | cytosol | 28.64 | 28.25 |
| Zm00001d042239_P001 | Maize | plastid | 27.73 | 27.85 |
| Zm00001d044670_P001 | Maize | nucleus | 34.55 | 27.24 |
| Zm00001d011926_P001 | Maize | cytosol | 25.0 | 27.23 |
| Zm00001d000310_P001 | Maize | cytosol | 29.55 | 26.64 |
| Zm00001d005038_P001 | Maize | plastid | 30.45 | 26.27 |
| Zm00001d052373_P001 | Maize | plastid | 31.36 | 26.24 |
| Zm00001d042237_P001 | Maize | mitochondrion | 24.55 | 24.11 |
| Zm00001d011924_P001 | Maize | plastid | 25.0 | 23.21 |
| Zm00001d029119_P001 | Maize | mitochondrion | 25.45 | 22.67 |
Protein Annotations
| EntrezGene:100273162 | Gene3D:3.20.90.20 | MapMan:35.1 | ProteinID:AQK57066.1 | UniProt:B4FTB7 | EMBL:BT040355 |
| InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR | InterPro:LOR_sf | PFAM:PF04525 | PANTHER:PTHR31087 |
| PANTHER:PTHR31087:SF5 | SUPFAM:SSF54518 | InterPro:Tubby-like_C | UniParc:UPI00017B837C | EnsemblPlantsGene:Zm00001d052371 | EnsemblPlants:Zm00001d052371_P001 |
| EnsemblPlants:Zm00001d052371_T001 | SEG:seg | : | : | : | : |
Description
Protein LURP-one-related 8
Coordinates
chr4:-:188392275..188393223
Molecular Weight (calculated)
23788.7 Da
IEP (calculated)
10.369
GRAVY (calculated)
-0.103
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVHPNAAE SVQAEAEGEL PTVLTVWRKS LLFNCDGFTV YDARGDLAFR VDCYAGSFRR RRRADVVLMD ATGKPLLTVR RKTRFGLAER WVIYDGDADD
101: GTTAGATPLL SVRRRRIGAC CKTLALARPR PRSAAAGTDA PSYVVEGSYG RRACAVRDAR GGAVVAEVQR KEAVGDDVFR LVVAGPRLGA PLSMALVIAL
201: DDMFRGGWSA RSLLRMSSPA
101: GTTAGATPLL SVRRRRIGAC CKTLALARPR PRSAAAGTDA PSYVVEGSYG RRACAVRDAR GGAVVAEVQR KEAVGDDVFR LVVAGPRLGA PLSMALVIAL
201: DDMFRGGWSA RSLLRMSSPA
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.