Factsheet for Zm00001d005038_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09156	Sorghum	plastid	78.43	78.74
Os12t0120500-01	Rice	plastid	59.22	66.23
Os11t0121000-00	Rice	plastid	58.82	65.5
TraesCS5A01G144800.1	Wheat	nucleus	57.25	61.09
HORVU5Hr1G046140.1	Barley	mitochondrion	56.47	59.26
TraesCS5B01G143600.1	Wheat	mitochondrion	57.25	58.87
TraesCS5D01G147500.1	Wheat	nucleus	56.47	57.6
Zm00001d052373_P001	Maize	plastid	58.04	56.27
GSMUA_Achr11P...	Banana	cytosol	40.39	50.24
GSMUA_Achr7P21840_001	Banana	cytosol	39.61	49.03
Zm00001d023305_P001	Maize	plastid	50.59	48.68
VIT_08s0056g00130.t01	Wine grape	cytosol	43.14	46.22
Zm00001d044670_P001	Maize	nucleus	50.2	45.88
PGSC0003DMT400030793	Potato	cytosol	34.51	41.31
GSMUA_Achr4P02400_001	Banana	cytosol	38.04	40.42
Solyc09g005210.2.1	Tomato	nucleus	37.65	36.64
Zm00001d044671_P001	Maize	cytosol	30.2	35.32
Zm00001d043087_P001	Maize	cytosol, extracellular, plastid	25.49	30.66
Zm00001d052371_P001	Maize	cytosol	26.27	30.45
Zm00001d011925_P001	Maize	cytosol	24.31	30.39
Zm00001d043318_P001	Maize	cytosol	26.27	30.04
Zm00001d042237_P001	Maize	mitochondrion	26.27	29.91
Zm00001d012520_P001	Maize	cytosol	23.53	29.13
Zm00001d038514_P001	Maize	plastid	25.49	28.76
Zm00001d044474_P001	Maize	cytosol	27.06	28.75
Zm00001d010627_P001	Maize	cytosol, plastid	25.1	28.32
Zm00001d011926_P001	Maize	cytosol	21.96	27.72
Zm00001d011924_P001	Maize	plastid	25.49	27.43
Zm00001d042239_P001	Maize	plastid	23.53	27.4
Zm00001d000310_P001	Maize	cytosol	25.88	27.05
Zm00001d052372_P002	Maize	plastid	27.06	21.9
Zm00001d029119_P001	Maize	mitochondrion	19.22	19.84

Protein Annotations

EnsemblPlants:Zm00001d005038_P001	EnsemblPlants:Zm00001d005038_T001	EnsemblPlantsGene:Zm00001d005038	EntrezGene:103647139	Gene3D:3.20.90.20	InterPro:IPR025659
InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF26
PFAM:PF04525	ProteinID:ONM20047.1	SEG:seg	SUPFAM:SSF54518	UniParc:UPI0002207978	UniProt:A0A1D6EIW7
MapMan:35.1	:	:	:	:	:

Description

Protein LURP-one-related 2

Coordinates

chr2:+:155403486..155405109

Molecular Weight (calculated)

27562.4 Da

IEP (calculated)

9.901

GRAVY (calculated)

-0.169

Length

255 amino acids

Sequence
(BLAST)

001: MTAAAFPDRS SGMMMAMSTS RIHPSSAAET ATTTQPLPPP PLPLPLPPLP PRRAGGRALH HTVWKRSSMG FPGTDGFSVY DAAGALAFRV DNYSRRRKVF
101: AGELLLMDGQ GAPLLALRPQ IFSMHDQWNC YAATASEEGE GKRTRPRRRL FSMRKCSLLQ KGHEAQVSMS GPCGSGCGSF WVEGCFARRS CKIRSGGGEE
201: VARITRKNAG AATALLGDDV FSLVVQPGAD CALVMAFVVV LDRICWQPYT PRICS

Best Arabidopsis Sequence Match ( AT5G01750.2 )
(BLAST)

001: MEQPYVYAYP QGSGPSGAPT PQAGGVVVDP KYCAPYPIDM AIVRKMMSLT DGNFVITDVN GNLLFKVKEP VFGLHDKRVL LDGSGTPVVT LREKMVSMHD
101: RWQVFRGGST DQRDLLYTVK RSSMLQLKTK LDVFLGHNKD EKRCDFRVKG SWLERSCVVY AGESDAIVAQ MHRKHTVQSV FLGKDNFSVT VYPNVDYAFI
201: ASLVVILDDV NREDRAA

Arabidopsis Description

Protein LURP-one-related 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZX1]
SUBAcon: [cytosol,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.