Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0120500-01 | Rice | plastid | 95.63 | 96.05 |
| TraesCS5A01G144800.1 | Wheat | nucleus | 67.25 | 64.44 |
| HORVU5Hr1G046140.1 | Barley | mitochondrion | 68.12 | 64.2 |
| TraesCS5B01G143600.1 | Wheat | mitochondrion | 69.43 | 64.11 |
| TraesCS5D01G147500.1 | Wheat | nucleus | 67.69 | 62.0 |
| EES09156 | Sorghum | plastid | 66.81 | 60.24 |
| Zm00001d005038_P001 | Maize | plastid | 65.5 | 58.82 |
| GSMUA_Achr11P... | Banana | cytosol | 45.41 | 50.73 |
| GSMUA_Achr7P21840_001 | Banana | cytosol | 44.98 | 50.0 |
| VIT_08s0056g00130.t01 | Wine grape | cytosol | 51.53 | 49.58 |
| PGSC0003DMT400030793 | Potato | cytosol | 39.3 | 42.25 |
| GSMUA_Achr4P02400_001 | Banana | cytosol | 41.05 | 39.17 |
| Solyc09g005210.2.1 | Tomato | nucleus | 44.1 | 38.55 |
| Os11t0120300-01 | Rice | cytosol | 27.95 | 28.96 |
| Os12t0120100-01 | Rice | cytosol | 27.95 | 28.83 |
| Os01t0817650-00 | Rice | cytosol, extracellular, plastid | 26.2 | 28.17 |
| Os01t0771000-01 | Rice | cytosol | 26.64 | 26.87 |
| Os05t0484800-01 | Rice | plastid | 27.07 | 26.5 |
| Os05t0311500-01 | Rice | cytosol | 24.02 | 25.58 |
| Os05t0510100-01 | Rice | cytosol | 26.2 | 25.32 |
| Os01t0931600-00 | Rice | cytosol | 22.27 | 23.61 |
| Os07t0672600-00 | Rice | plastid | 23.14 | 23.14 |
| Os01t0931700-00 | Rice | plastid | 13.1 | 18.29 |
Protein Annotations
| EnsemblPlants:Os11t0121000-00 | EnsemblPlantsGene:Os11g0121000 | EntrezGene:107277296 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 |
| InterPro:LOR | InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF26 | PFAM:PF04525 |
| ProteinID:BAT12452.1 | ProteinID:EEE51543.1 | RefSeq:XP_015615985.1 | SEG:seg | SUPFAM:SSF54518 | UniParc:UPI00019353BD |
| UniProt:B9G937 | MapMan:35.1 | : | : | : | : |
Description
Hypothetical conserved gene. (Os11t0121000-00)
Coordinates
chr11:-:931165..933160
Molecular Weight (calculated)
25217.1 Da
IEP (calculated)
9.347
GRAVY (calculated)
-0.282
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRIHPSNQR QDAAAAAAAS TAAARAAVYT VWKRSSMGFQ GTDGFSVYDH AGTLAFRVDN YSRRRKLFSG DLLLMDGHGS PLLALTPQII SMHDQWNCYR
101: ASEEGQGKRT RSQQLFSMRK CSVMQSSHEA EVHMSGCTHA SSDRTGHVPG FSIEGSFRRR SCKIRNSVGE EVARITRKKA GAASLSLTLA EDVFSLEVQP
201: NVDCAMIMAF VIALDRICWK PYTPMICSS
101: ASEEGQGKRT RSQQLFSMRK CSVMQSSHEA EVHMSGCTHA SSDRTGHVPG FSIEGSFRRR SCKIRNSVGE EVARITRKKA GAASLSLTLA EDVFSLEVQP
201: NVDCAMIMAF VIALDRICWK PYTPMICSS
001: MEQPYVYAYP QGSGPSGAPT PQAGGVVVDP KYCAPYPIDM AIVRKMMSLT DGNFVITDVN GNLLFKVKEP VFGLHDKRVL LDGSGTPVVT LREKMVSMHD
101: RWQVFRGGST DQRDLLYTVK RSSMLQLKTK LDVFLGHNKD EKRCDFRVKG SWLERSCVVY AGESDAIVAQ MHRKHTVQSV FLGKDNFSVT VYPNVDYAFI
201: ASLVVILDDV NREDRAA
101: RWQVFRGGST DQRDLLYTVK RSSMLQLKTK LDVFLGHNKD EKRCDFRVKG SWLERSCVVY AGESDAIVAQ MHRKHTVQSV FLGKDNFSVT VYPNVDYAFI
201: ASLVVILDDV NREDRAA
Arabidopsis Description
Protein LURP-one-related 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZX1]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.