Factsheet for Os01t0771000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plastid 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80120.1	Os01t0267900-01	AT2G41090.1	17360592
AT1G80120.1	Os01t0279300-01	AT2G41090.1	17360592
AT1G80120.1	Os01t0810300-01	AT2G41090.1	17360592
AT1G80120.1	Os03t0319300-01	AT2G41090.1	17360592
AT1G80120.1	Os05t0491000-01	AT2G41090.1	17360592
AT1G80120.1	Os05t0491100-01	AT2G41090.1	17360592
AT1G80120.1	Os07t0687200-02	AT2G41090.1	17360592
AT1G80120.1	Os12t0603800-00	AT2G41090.1	17360592
AT1G80120.1	Os01t0267900-01	AT5G21274.1	17360592
AT1G80120.1	Os01t0279300-01	AT5G21274.1	17360592
AT1G80120.1	Os01t0810300-01	AT5G21274.1	17360592
AT1G80120.1	Os03t0319300-01	AT5G21274.1	17360592
AT1G80120.1	Os05t0491000-01	AT5G21274.1	17360592
AT1G80120.1	Os05t0491100-01	AT5G21274.1	17360592
AT1G80120.1	Os07t0687200-02	AT5G21274.1	17360592
AT1G80120.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G306600.1	Wheat	cytosol	82.82	85.84
TraesCS3B01G340800.1	Wheat	cytosol	82.82	85.45
TraesCS3A01G296300.1	Wheat	cytosol	82.82	85.45
HORVU3Hr1G075150.1	Barley	cytosol	81.94	84.93
EES03690	Sorghum	cytosol	81.06	82.51
Zm00001d043318_P001	Maize	cytosol	78.85	80.27
Os05t0510100-01	Rice	cytosol	66.08	63.29
GSMUA_Achr3P13680_001	Banana	cytosol	32.6	56.49
Solyc03g116710.2.1	Tomato	cytosol	45.81	49.29
PGSC0003DMT400001705	Potato	cytosol	45.81	49.29
AT1G80120.1	Thale cress	cytosol	44.49	48.1
VIT_09s0002g06920.t01	Wine grape	cytosol	43.61	47.83
CDY37567	Canola	cytosol	44.05	47.62
CDY41119	Canola	cytosol	44.05	47.62
Bra008497.1-P	Field mustard	cytosol	44.05	47.62
KRH09722	Soybean	cytosol	45.37	47.03
KRH44464	Soybean	cytosol	45.37	47.03
KRH23583	Soybean	cytosol	45.37	46.82
CDY58464	Canola	cytosol	43.61	46.48
KRH47444	Soybean	cytosol	44.49	46.12
Bra001606.1-P	Field mustard	cytosol	43.17	46.01
CDX75845	Canola	cytosol	42.73	45.54
CDY30113	Canola	cytosol	42.73	44.29
Bra027206.1-P	Field mustard	cytosol	42.29	43.84
AT3G15810.1	Thale cress	cytosol	42.29	43.64
CDX87294	Canola	cytosol	42.73	37.74
Bra035195.1-P	Field mustard	cytosol	32.6	35.24
Os01t0817650-00	Rice	cytosol, extracellular, plastid	30.4	32.39
Os11t0120300-01	Rice	cytosol	29.07	29.86
Os05t0311500-01	Rice	cytosol	28.19	29.77
Os12t0120100-01	Rice	cytosol	29.07	29.73
Os12t0120500-01	Rice	plastid	27.31	27.19
Os11t0121000-00	Rice	plastid	26.87	26.64
Os05t0484800-01	Rice	plastid	24.23	23.5
Os01t0931600-00	Rice	cytosol	20.26	21.3
Os07t0672600-00	Rice	plastid	20.26	20.09
Os01t0931700-00	Rice	plastid	8.81	12.2

Protein Annotations

EMBL:AK069298	EnsemblPlants:Os01t0771000-01	EnsemblPlantsGene:Os01g0771000	EntrezGene:4324612	Gene3D:3.20.90.20	InterPro:IPR025659
InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF2
PFAM:PF04525	ProteinID:BAB56075.1	ProteinID:BAF06295.1	ProteinID:BAS74552.1	RefSeq:XP_015634848.1	SEG:seg
SUPFAM:SSF54518	UniParc:UPI00000A578D	UniProt:Q94EE1	MapMan:35.1	:	:

Description

Protein of unknown function DUF567 family protein. (Os01t0771000-01)

Coordinates

chr1:-:32534857..32535912

Molecular Weight (calculated)

23765.3 Da

IEP (calculated)

7.561

GRAVY (calculated)

-0.008

Length

227 amino acids

Sequence
(BLAST)

001: MAIVGEEYCS AEERVLTVRK TSHFSPGDGF AAYDHRTGGL AFRADTYGRG HGGGAASAGE LALLGPAGEA LITVRRRRPS LHQRWEGYLG ARADGQKPLF
101: SARRSSILGG AAAGAVVELL APLPASFSST HAAAAELLRV DGSFPRRCCR VVAPKAESGG EAAVVAEIRR KVDEGARVVM GRDVFVLRVG AGFDAAFAMA
201: IVLVLDQIAG DEADGNAGEE TNRAMIW

Best Arabidopsis Sequence Match ( AT3G15810.1 )
(BLAST)

001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED

Arabidopsis Description

Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.