Factsheet for AT1G80120.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41119	Canola	cytosol	92.86	92.86
CDY37567	Canola	cytosol	92.86	92.86
Bra008497.1-P	Field mustard	cytosol	92.38	92.38
CDX87294	Canola	cytosol	89.05	72.76
Bra035195.1-P	Field mustard	cytosol	71.43	71.43
VIT_09s0002g06920.t01	Wine grape	cytosol	66.19	67.15
KRH47444	Soybean	cytosol	64.76	62.1
KRH23583	Soybean	cytosol	64.76	61.82
KRH09722	Soybean	cytosol	63.81	61.19
AT3G15810.1	Thale cress	cytosol	63.33	60.45
KRH44464	Soybean	cytosol	62.86	60.27
GSMUA_Achr3P13680_001	Banana	cytosol	33.81	54.2
TraesCS3A01G296300.1	Wheat	cytosol	49.05	46.82
TraesCS3B01G340800.1	Wheat	cytosol	49.05	46.82
TraesCS3D01G306600.1	Wheat	cytosol	48.57	46.58
HORVU3Hr1G075150.1	Barley	cytosol	48.57	46.58
EES03690	Sorghum	cytosol	47.62	44.84
Os01t0771000-01	Rice	cytosol	48.1	44.49
Zm00001d043318_P001	Maize	cytosol	47.14	44.39
HORVU1Hr1G077760.1	Barley	cytosol	44.76	40.87
Os05t0510100-01	Rice	cytosol	45.24	40.08
TraesCS1B01G341900.1	Wheat	cytosol	44.29	39.57
TraesCS1D01G330600.1	Wheat	cytosol	44.29	39.41
Zm00001d000310_P001	Maize	cytosol	45.71	39.34
EES18481	Sorghum	cytosol	44.76	39.0
AT2G38640.1	Thale cress	cytosol	36.19	38.78
TraesCS1A01G328100.1	Wheat	cytosol	44.29	38.27
AT5G41590.1	Thale cress	cytosol	32.86	31.22
AT1G63410.2	Thale cress	cytosol	24.29	23.72
AT1G53870.3	Thale cress	cytosol, nucleus, peroxisome	24.29	23.5
AT1G53875.1	Thale cress	cytosol, mitochondrion, nucleus, peroxisome	25.24	23.25
AT3G14260.1	Thale cress	cytosol	24.76	22.61
AT1G53890.3	Thale cress	cytosol	22.38	19.34

Protein Annotations

Gene3D:3.20.90.20	MapMan:35.1	EntrezGene:844352	ProteinID:AAD55470.1	ProteinID:AEE36359.1	ArrayExpress:AT1G80120
EnsemblPlantsGene:AT1G80120	RefSeq:AT1G80120	TAIR:AT1G80120	RefSeq:AT1G80120-TAIR-G	EnsemblPlants:AT1G80120.1	TAIR:AT1G80120.1
EMBL:BT004042	EMBL:BT005160	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf
RefSeq:NP_178129.1	PFAM:PF04525	PO:PO:0000293	PANTHER:PTHR31087	PANTHER:PTHR31087:SF2	UniProt:Q9SSC7
SUPFAM:SSF54518	InterPro:Tubby-like_C	UniParc:UPI000000C24C	SEG:seg	:	:

Description

Protein LURP-one-related 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSC7]

Coordinates

chr1:+:30138818..30140360

Molecular Weight (calculated)

23454.9 Da

IEP (calculated)

5.423

GRAVY (calculated)

-0.311

Length

210 amino acids

Sequence
(BLAST)

001: MKGGLLVDDE FIHGEERSLT VRKTSLFFAG DGFTVYDCKG SLVFRVDSYG GPNTRDTDEV VLMDAHGRCL LTLRRKRPSL RRRWEGYLGE RSDGQKPIFG
101: VRRSSIIGRN SVTVEVYGDY QCSEYLIEGS FGARNCTVVE AETRRKVAEI RRKVDASTNV MLGKDVFSLN VKPGFDGAFA MGLVLVLDQI YGDDLLEVGE
201: EQVHPSAEDL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.