CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80120.1	KRG89812	AT2G41090.1	17360592
AT1G80120.1	KRG94975	AT2G41090.1	17360592
AT1G80120.1	KRH18664	AT2G41090.1	17360592
AT1G80120.1	KRG89812	AT5G21274.1	17360592
AT1G80120.1	KRG94975	AT5G21274.1	17360592
AT1G80120.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47444	Soybean	cytosol	92.24	92.24
KRH09722	Soybean	cytosol	73.52	73.52
KRH23583	Soybean	cytosol	73.06	72.73
VIT_09s0002g06920.t01	Wine grape	cytosol	63.93	67.63
Bra008497.1-P	Field mustard	cytosol	61.19	63.81
CDY41119	Canola	cytosol	61.19	63.81
CDY37567	Canola	cytosol	61.19	63.81
AT1G80120.1	Thale cress	cytosol	60.27	62.86
GSMUA_Achr3P13680_001	Banana	cytosol	32.88	54.96
CDX87294	Canola	cytosol	59.82	50.97
Bra035195.1-P	Field mustard	cytosol	48.4	50.48
TraesCS3B01G340800.1	Wheat	cytosol	48.4	48.18
TraesCS3A01G296300.1	Wheat	cytosol	48.4	48.18
HORVU3Hr1G075150.1	Barley	cytosol	47.95	47.95
TraesCS3D01G306600.1	Wheat	cytosol	47.95	47.95
EES03690	Sorghum	cytosol	47.03	46.19
Zm00001d043318_P001	Maize	cytosol	46.58	45.74
Os01t0771000-01	Rice	cytosol	47.03	45.37
HORVU1Hr1G077760.1	Barley	cytosol	42.92	40.87
TraesCS1B01G341900.1	Wheat	cytosol	43.38	40.43
TraesCS1D01G330600.1	Wheat	cytosol	43.38	40.25
Os05t0510100-01	Rice	cytosol	43.38	40.08
Zm00001d000310_P001	Maize	cytosol	44.29	39.75
EES18481	Sorghum	cytosol	43.38	39.42
TraesCS1A01G328100.1	Wheat	cytosol	43.38	39.09
KRH41249	Soybean	cytosol	34.25	33.48
KRH59981	Soybean	cytosol, mitochondrion	33.79	32.31
KRH09578	Soybean	cytosol	30.59	32.21
KRH77592	Soybean	cytosol	33.33	32.16
KRH27882	Soybean	cytosol	33.79	31.62
KRH47711	Soybean	peroxisome	25.11	27.92
KRH59852	Soybean	cytosol	23.74	26.53
KRH06275	Soybean	peroxisome	24.2	26.37
KRH41152	Soybean	cytosol	17.35	25.5
KRH27952	Soybean	cytosol	22.37	25.39
KRH77515	Soybean	cytosol	21.92	24.74

Protein Annotations

EMBL:ACUP02004928	EnsemblPlants:KRH44464	EnsemblPlantsGene:GLYMA_08G212600	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF50	PFAM:PF04525
ProteinID:KRH44464	ProteinID:KRH44464.1	SUPFAM:SSF54518	UniParc:UPI0002338F7E	UniProt:I1KVF2	MapMan:35.1

Description

hypothetical protein

Coordinates

chr8:-:17145699..17147010

Molecular Weight (calculated)

24659.7 Da

IEP (calculated)

6.777

GRAVY (calculated)

-0.195

Length

219 amino acids

Sequence
(BLAST)

001: MKEELVVQEG YLFKEETKLT VLKTSLFFSG DGFAVYDSKG NLVFRFDSYG PLARDKDELV LMDPHGRSLL TLRRKKPSLH QRWEGFKGER KDGDKPVFSV
101: KRSSIIGRSR TSVAVEVYDS PGVEYLIEGC FPQRCCKVFN AAKELVAEIR RKVDPTTSVM LGKEVFWLCV KPAFDAAFAM GIVLVLDQIN GENYFDDRIV
201: EPAVHPATED PGFVSPVPV

Best Arabidopsis Sequence Match ( AT3G15810.1 )
(BLAST)

001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED

Arabidopsis Description

Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.