Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH09722 | Soybean | cytosol | 91.36 | 91.78 |
KRH47444 | Soybean | cytosol | 73.64 | 73.97 |
KRH44464 | Soybean | cytosol | 72.73 | 73.06 |
VIT_09s0002g06920.t01 | Wine grape | cytosol | 66.82 | 71.01 |
AT1G80120.1 | Thale cress | cytosol | 61.82 | 64.76 |
Bra008497.1-P | Field mustard | cytosol | 60.91 | 63.81 |
CDY37567 | Canola | cytosol | 60.91 | 63.81 |
CDY41119 | Canola | cytosol | 60.91 | 63.81 |
GSMUA_Achr3P13680_001 | Banana | cytosol | 30.91 | 51.91 |
CDX87294 | Canola | cytosol | 60.0 | 51.36 |
Bra035195.1-P | Field mustard | cytosol | 48.64 | 50.95 |
HORVU3Hr1G075150.1 | Barley | cytosol | 47.27 | 47.49 |
TraesCS3A01G296300.1 | Wheat | cytosol | 47.27 | 47.27 |
TraesCS3B01G340800.1 | Wheat | cytosol | 47.27 | 47.27 |
TraesCS3D01G306600.1 | Wheat | cytosol | 46.82 | 47.03 |
EES03690 | Sorghum | cytosol | 46.82 | 46.19 |
Zm00001d043318_P001 | Maize | cytosol | 46.82 | 46.19 |
Os01t0771000-01 | Rice | cytosol | 46.82 | 45.37 |
HORVU1Hr1G077760.1 | Barley | cytosol | 41.36 | 39.57 |
Os05t0510100-01 | Rice | cytosol | 41.82 | 38.82 |
TraesCS1B01G341900.1 | Wheat | cytosol | 40.91 | 38.3 |
TraesCS1D01G330600.1 | Wheat | cytosol | 40.91 | 38.14 |
Zm00001d000310_P001 | Maize | cytosol | 42.27 | 38.11 |
EES18481 | Sorghum | cytosol | 41.36 | 37.76 |
TraesCS1A01G328100.1 | Wheat | cytosol | 41.36 | 37.45 |
KRH09578 | Soybean | cytosol | 31.36 | 33.17 |
KRH41249 | Soybean | cytosol | 31.36 | 30.8 |
KRH27882 | Soybean | cytosol | 32.73 | 30.77 |
KRH77592 | Soybean | cytosol | 31.36 | 30.4 |
KRH59981 | Soybean | cytosol, mitochondrion | 30.45 | 29.26 |
KRH47711 | Soybean | peroxisome | 25.0 | 27.92 |
KRH59852 | Soybean | cytosol | 24.09 | 27.04 |
KRH27952 | Soybean | cytosol | 23.18 | 26.42 |
KRH06275 | Soybean | peroxisome | 24.09 | 26.37 |
KRH77515 | Soybean | cytosol | 22.73 | 25.77 |
KRH41152 | Soybean | cytosol | 15.91 | 23.49 |
Protein Annotations
EMBL:ACUP02008474 | EnsemblPlants:KRH23583 | EnsemblPlantsGene:GLYMA_13G365700 | EntrezGene:100787085 | Gene3D:3.20.90.20 | InterPro:IPR025659 |
InterPro:IPR038595 | InterPro:LOR | InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF2 |
PFAM:PF04525 | ProteinID:KRH23583 | ProteinID:KRH23583.1 | SEG:seg | SUPFAM:SSF54518 | UniParc:UPI00023CEB5F |
UniProt:I1M5U3 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:45171683..45172413
Molecular Weight (calculated)
24676.4 Da
IEP (calculated)
4.561
GRAVY (calculated)
-0.232
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTLCMAENM KEVEVEDGYV LKEEIHLTVL KTSLFFAGDG FSVYDCKGQL VFRVDSYGPD TRDIDELVLM DPNGRCLLTV RRKQRPSLHQ RWEGFKGERM
101: DGDKPIFSVR RASIIGRSRA SLTVEMYDNP GEEYQIEGCF SQRCCTVFNV TKESVAEISR KVDPTTSVVL GKEVFSLCVK PGFDAAFAMG FVLVLDQISG
201: EDYVDNIATT EPTVHPATED
101: DGDKPIFSVR RASIIGRSRA SLTVEMYDNP GEEYQIEGCF SQRCCTVFNV TKESVAEISR KVDPTTSVVL GKEVFSLCVK PGFDAAFAMG FVLVLDQISG
201: EDYVDNIATT EPTVHPATED
001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED
Arabidopsis Description
Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.