CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27882	Soybean	cytosol	93.83	91.03
KRH41249	Soybean	cytosol	71.81	72.77
KRH59981	Soybean	cytosol, mitochondrion	72.25	71.62
VIT_02s0025g00500.t01	Wine grape	cytosol	61.67	63.64
PGSC0003DMT400031740	Potato	plastid	53.74	51.91
Solyc08g081680.1.1	Tomato	nucleus	52.42	51.52
AT5G41590.1	Thale cress	cytosol	45.37	46.61
Bra025487.1-P	Field mustard	cytosol	44.93	45.74
Bra025486.1-P	Field mustard	cytosol	44.93	45.74
KRH09578	Soybean	cytosol	33.92	37.02
KRH44464	Soybean	cytosol	32.16	33.33
KRH47444	Soybean	cytosol	31.72	32.88
KRH09722	Soybean	cytosol	30.4	31.51
KRH23583	Soybean	cytosol	30.4	31.36
KRH47711	Soybean	peroxisome	25.11	28.93
KRH06275	Soybean	peroxisome	24.67	27.86
KRH59852	Soybean	cytosol	23.79	27.55
KRH27952	Soybean	cytosol	22.03	25.91
KRH41152	Soybean	cytosol	16.74	25.5
KRH77515	Soybean	cytosol	21.15	24.74

Protein Annotations

EntrezGene:100804978	Gene3D:3.20.90.20	MapMan:35.1	EMBL:ACUP02000680	ncoils:Coil	EnsemblPlantsGene:GLYMA_01G222600
UniProt:I1JAA0	InterPro:IPR025659	InterPro:IPR038595	EnsemblPlants:KRH77592	ProteinID:KRH77592	ProteinID:KRH77592.1
InterPro:LOR	InterPro:LOR_sf	PFAM:PF04525	PANTHER:PTHR31087	PANTHER:PTHR31087:SF14	SUPFAM:SSF54518
InterPro:Tubby-like_C	UniParc:UPI0002337607	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:55141369..55142553

Molecular Weight (calculated)

25800.2 Da

IEP (calculated)

10.060

GRAVY (calculated)

-0.335

Length

227 amino acids

Sequence
(BLAST)

001: MRVFPRLKSL SRAVHEEQEE EKNKAAEKLC TSLTVWRKSL VMSCKGFTVI DSHGNLVYRV DNYIGRPNEV TLMDASGKSI LTMCRRRKLG VLDSWFVYEG
101: EVGNNNMRTR TRRSSSNLSK SSNRPICCVR KHVNILHGNT NVQAYVYRGA SSHSDKRCAA FTIEGSYAHR TCKVLDECRR VVAEIKRKEA NTKNVSFGIE
201: IFQLIVHSGF DPAFAMALVL LLDQMFT

Best Arabidopsis Sequence Match ( AT5G41590.1 )
(BLAST)

001: MFPFLKQRSR SVHGEDAPSS TESTVSVAAA DIGGACTTLT VWRKSLLVSC EGFTVIDSNG DLIYRVDNYA RTRPEELILM DKDGNSLLLM HRTKKITLVD
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S

Arabidopsis Description

Protein LURP-one-related 17 [Source:UniProtKB/Swiss-Prot;Acc:A0MFL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.