CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59852	Soybean	cytosol	92.62	70.41
KRH27952	Soybean	cytosol	61.07	47.15
KRH77515	Soybean	cytosol	59.73	45.88
CDY45367	Canola	cytosol	34.23	33.12
VIT_02s0025g03750.t01	Wine grape	cytosol	46.31	32.86
VIT_02s0025g03730.t01	Wine grape	cytosol	44.3	32.67
VIT_02s0025g03740.t01	Wine grape	plastid	44.97	32.52
Solyc12g056310.1.1	Tomato	plastid	40.94	30.96
Solyc08g080770.2.1	Tomato	plastid	43.62	30.66
Solyc08g080760.1.1	Tomato	mitochondrion	40.27	30.15
PGSC0003DMT400032165	Potato	cytosol	34.9	30.06
PGSC0003DMT400007876	Potato	plastid	39.6	29.35
PGSC0003DMT400032166	Potato	plastid	41.61	29.25
Solyc08g080750.2.1	Tomato	plastid	38.93	28.71
KRH47711	Soybean	peroxisome	36.24	27.41
KRH06275	Soybean	peroxisome	36.91	27.36
Solyc08g007980.2.1	Tomato	plastid	37.58	26.92
PGSC0003DMT400014913	Potato	plastid	37.58	26.92
Bra027804.1-P	Field mustard	cytosol	33.56	26.18
CDY49893	Canola	cytosol	33.56	26.18
HORVU2Hr1G019720.1	Barley	plastid	36.24	25.84
EER99890	Sorghum	plastid	34.9	25.62
TraesCS2A01G113800.1	Wheat	plastid	35.57	25.36
Os07t0672600-00	Rice	plastid	38.26	24.89
TraesCS2B01G132800.1	Wheat	plastid	35.57	24.77
TraesCS2D01G114400.1	Wheat	plastid	35.57	24.54
AT1G63410.2	Thale cress	cytosol	34.9	24.19
PGSC0003DMT400012847	Potato	cytosol	20.81	23.48
Zm00001d029119_P001	Maize	mitochondrion	34.23	20.65
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	33.56	20.58
HORVU6Hr1G081400.1	Barley	mitochondrion	34.23	20.16
KXG39402	Sorghum	mitochondrion	34.9	20.16
TraesCS4D01G168500.1	Wheat	mitochondrion	34.23	19.77
PGSC0003DMT400010898	Potato	cytosol	16.78	19.68
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	32.89	19.6
KRH09578	Soybean	cytosol	24.83	17.79
KRH47444	Soybean	cytosol	25.5	17.35
KRH44464	Soybean	cytosol	25.5	17.35
KRH77592	Soybean	cytosol	25.5	16.74
KRH27882	Soybean	cytosol	25.5	16.24
KRH09722	Soybean	cytosol	23.49	15.98
KRH23583	Soybean	cytosol	23.49	15.91
KRH59981	Soybean	cytosol, mitochondrion	24.16	15.72
KRH41249	Soybean	cytosol	23.49	15.62
GSMUA_Achr3P24000_001	Banana	nucleus	41.61	7.51

Protein Annotations

EMBL:ACUP02004751	EnsemblPlants:KRH41152	EnsemblPlantsGene:GLYMA_08G013100	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF25	PFAM:PF04525
ProteinID:KRH41152	ProteinID:KRH41152.1	SUPFAM:SSF54518	UniParc:UPI00023C5C2D	UniProt:I1KP87	MapMan:35.1

Description

hypothetical protein

Coordinates

chr8:-:1026779..1027856

Molecular Weight (calculated)

17198.0 Da

IEP (calculated)

9.667

GRAVY (calculated)

-0.411

Length

149 amino acids

Sequence
(BLAST)

001: MAKVYPQIIP TSPDQTQCLT SKRETYTLWL KSLVFHSNGC TVYDSNGDIV YRVDNYDRKG RREVNLMDLR GKVLCTIKKR LLALGCWEGH RCMSSDFGTQ
101: EQPWFQVKRC NQMIKGKVAC QISVGCQKYS LVRISGKTEA FKIVTWMDK

Best Arabidopsis Sequence Match ( AT1G63410.3 )
(BLAST)

001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVNI SIF

Arabidopsis Description

Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.