Factsheet for Solyc08g080750.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007876	Potato	plastid	96.53	97.01
Solyc08g007980.2.1	Tomato	plastid	70.79	68.75
VIT_02s0025g03730.t01	Wine grape	cytosol	52.97	52.97
Solyc08g080770.2.1	Tomato	plastid	53.96	51.42
VIT_02s0025g03740.t01	Wine grape	plastid	51.49	50.49
VIT_02s0025g03750.t01	Wine grape	cytosol	52.48	50.48
Solyc12g056310.1.1	Tomato	plastid	49.01	50.25
Solyc08g080760.1.1	Tomato	mitochondrion	49.01	49.75
KRH27952	Soybean	cytosol	44.55	46.63
KRH59852	Soybean	cytosol	42.08	43.37
KRH77515	Soybean	cytosol	41.58	43.3
Bra027804.1-P	Field mustard	cytosol	40.59	42.93
CDY49893	Canola	cytosol	40.1	42.41
CDY45367	Canola	cytosol	30.2	39.61
AT1G63410.2	Thale cress	cytosol	41.58	39.07
KRH41152	Soybean	cytosol	28.71	38.93
HORVU2Hr1G019720.1	Barley	plastid	39.11	37.8
TraesCS2A01G113800.1	Wheat	plastid	39.11	37.8
TraesCS2B01G132800.1	Wheat	plastid	39.11	36.92
TraesCS2D01G114400.1	Wheat	plastid	39.11	36.57
EER99890	Sorghum	plastid	36.63	36.45
Os07t0672600-00	Rice	plastid	38.61	34.06
Zm00001d029119_P001	Maize	mitochondrion	40.59	33.2
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	39.11	32.51
HORVU6Hr1G081400.1	Barley	mitochondrion	39.6	31.62
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	39.11	31.6
KXG39402	Sorghum	mitochondrion	40.1	31.4
TraesCS4D01G168500.1	Wheat	mitochondrion	39.6	31.01
Solyc03g116710.2.1	Tomato	cytosol	26.24	25.12
Solyc08g081680.1.1	Tomato	nucleus	26.73	23.38
Solyc09g005210.2.1	Tomato	nucleus	25.25	19.47
GSMUA_Achr3P24000_001	Banana	nucleus	42.57	10.41

Protein Annotations

EnsemblPlants:Solyc08g080750.2.1	EnsemblPlantsGene:Solyc08g080750.2	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF25	PFAM:PF04525	PFscan:PS51257
SEG:seg	SUPFAM:SSF54518	UniParc:UPI000276BAEB	UniProt:K4CP73	MapMan:35.1	:

Description

No Description!

Coordinates

chr8:+:63957966..63959305

Molecular Weight (calculated)

22748.4 Da

IEP (calculated)

9.123

GRAVY (calculated)

-0.255

Length

202 amino acids

Sequence
(BLAST)

001: MGKIHPENIS SPSSSSSCSS PYVTSNKEIF TIWMKSLVFH GNGCTVFNSK GELCFRVDNY QERCSNEVFL MDLNGQVLFS IKKEKLRVFG RWNGYLCGGF
101: KGRPWFQVKK NCTFSRGNVI CNVNLGYEKS IESCYKIQKL DKKSSFKVTN STGEIVAELK QKQSSRGFAY GDDVLTLEVE PQVDQSLIMA LVTICGLISR
201: KL

Best Arabidopsis Sequence Match ( AT1G63410.1 )
(BLAST)

001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGV V

Arabidopsis Description

Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.