Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0025g03740.t01 | Wine grape | plastid | 93.56 | 91.75 |
| VIT_02s0025g03750.t01 | Wine grape | cytosol | 84.16 | 80.95 |
| PGSC0003DMT400032165 | Potato | cytosol | 49.01 | 57.23 |
| Solyc08g080760.1.1 | Tomato | mitochondrion | 54.95 | 55.78 |
| PGSC0003DMT400007876 | Potato | plastid | 54.46 | 54.73 |
| Solyc08g080770.2.1 | Tomato | plastid | 56.93 | 54.25 |
| PGSC0003DMT400010898 | Potato | cytosol | 33.66 | 53.54 |
| Solyc12g056310.1.1 | Tomato | plastid | 51.98 | 53.3 |
| Solyc08g080750.2.1 | Tomato | plastid | 52.97 | 52.97 |
| PGSC0003DMT400032166 | Potato | plastid | 55.45 | 52.83 |
| PGSC0003DMT400014913 | Potato | plastid | 51.98 | 50.48 |
| Solyc08g007980.2.1 | Tomato | plastid | 50.49 | 49.04 |
| KRH59852 | Soybean | cytosol | 46.53 | 47.96 |
| KRH27952 | Soybean | cytosol | 45.54 | 47.67 |
| KRH77515 | Soybean | cytosol | 45.54 | 47.42 |
| PGSC0003DMT400012847 | Potato | cytosol | 30.2 | 46.21 |
| Bra027804.1-P | Field mustard | cytosol | 43.56 | 46.07 |
| CDY49893 | Canola | cytosol | 43.56 | 46.07 |
| KRH41152 | Soybean | cytosol | 32.67 | 44.3 |
| HORVU2Hr1G019720.1 | Barley | plastid | 45.54 | 44.02 |
| TraesCS2A01G113800.1 | Wheat | plastid | 45.54 | 44.02 |
| TraesCS2B01G132800.1 | Wheat | plastid | 46.53 | 43.93 |
| EER99890 | Sorghum | plastid | 44.06 | 43.84 |
| TraesCS2D01G114400.1 | Wheat | plastid | 46.04 | 43.06 |
| CDY45367 | Canola | cytosol | 32.67 | 42.86 |
| AT1G63410.2 | Thale cress | cytosol | 44.06 | 41.4 |
| Os07t0672600-00 | Rice | plastid | 46.53 | 41.05 |
| TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 43.56 | 36.21 |
| TraesCS4B01G155500.1 | Wheat | cytosol, mitochondrion | 43.56 | 35.2 |
| HORVU6Hr1G081400.1 | Barley | mitochondrion | 43.56 | 34.78 |
| TraesCS4D01G168500.1 | Wheat | mitochondrion | 44.06 | 34.5 |
| Zm00001d029119_P001 | Maize | mitochondrion | 42.08 | 34.41 |
| KXG39402 | Sorghum | mitochondrion | 41.58 | 32.56 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 32.18 | 32.5 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 33.66 | 31.48 |
| VIT_02s0025g00500.t01 | Wine grape | cytosol | 31.68 | 29.09 |
| VIT_09s0002g06920.t01 | Wine grape | cytosol | 27.72 | 27.05 |
| VIT_08s0056g00130.t01 | Wine grape | cytosol | 27.72 | 23.53 |
| GSMUA_Achr3P24000_001 | Banana | nucleus | 49.01 | 11.99 |
Protein Annotations
| EntrezGene:100246131 | wikigene:100246131 | Gene3D:3.20.90.20 | MapMan:35.1 | ProteinID:CCB58362 | ProteinID:CCB58362.1 |
| UniProt:F6HUD9 | EMBL:FN596251 | InterPro:IPR025659 | InterPro:IPR038595 | EntrezGene:LOC100246131 | wikigene:LOC100246131 |
| InterPro:LOR | InterPro:LOR_sf | PFAM:PF04525 | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF25 | SUPFAM:SSF54518 |
| InterPro:Tubby-like_C | UniParc:UPI00015CD32B | ArrayExpress:VIT_02s0025g03730 | EnsemblPlantsGene:VIT_02s0025g03730 | EnsemblPlants:VIT_02s0025g03730.t01 | RefSeq:XP_002269503 |
| RefSeq:XP_002269503.1 | RefSeq:XP_019081281.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2:+:3236091..3236911
Molecular Weight (calculated)
22596.4 Da
IEP (calculated)
9.715
GRAVY (calculated)
-0.276
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVHPQRPA PPSPPSDSYI TSRRETFTLW MKSLVIRGNG YTVFNSDGEI VYRMDNYDKK CSSEVYLMDL QGKVLFTILR RKLRVFGRWE GYKCSGSKVG
101: SQKPCFQVRK HCRILGGGSS CEVTVRPNEA QSYHYRIQGL AGKSTFKIVN SEGGVMAEVK QKQTSSGVVL GDDVLDLVVE PHVDHSLVMA LVAVCGLIHH
201: RM
101: SQKPCFQVRK HCRILGGGSS CEVTVRPNEA QSYHYRIQGL AGKSTFKIVN SEGGVMAEVK QKQTSSGVVL GDDVLDLVVE PHVDHSLVMA LVAVCGLIHH
201: RM
001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGV V
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGV V
Arabidopsis Description
Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.